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SCNpilot_BF_INOC_scaffold_2270

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2270_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1581
DNA (1581bp) protein (527aa)
Surface antigen BspA-like n=1 Tax=Trichomonas vaginalis RepID=A2DVL8_TRIVA
hypothetical protein
Fibronectin type III domain {ECO:0000313|EMBL:CBL35292.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V1
SCNpilot_BF_INOC_scaffold_2270_2
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

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1650..5480
DNA (3831bp) protein (1277aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1CQ05_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD04370.1, ECO:0000313|EnsemblProtists:EOD04370}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emili
Chitin binding protein
SCNpilot_BF_INOC_scaffold_2270_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5547..6218)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MSQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92754.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
SCNpilot_BF_INOC_scaffold_2270_4
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6432..6662
DNA (231bp) protein (77aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23647.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
FeoB family ferrous iron (Fe2+) uptake protein id=2036538 bin=GWA2_Tenericute_38_26 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
SCNpilot_BF_INOC_scaffold_2270_5
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6776..8590
DNA (1815bp) protein (605aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDZ23648.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
feoB; bifunctional ferrous iron transporter, protein b/GTP-binding protein/membrane protein; K04759 ferrous iron transport protein B id=5093743 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
SCNpilot_BF_INOC_scaffold_2270_6
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8664..9047
DNA (384bp) protein (128aa)
Ferric uptake regulator, Fur family n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6N8_ETHHY
ferric uptake regulator, Fur family
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:CDZ23649.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cel
SCNpilot_BF_INOC_scaffold_2270_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9018..9668)
DNA (651bp) protein (217aa)
Putative sporulation protein YtaF n=1 Tax=Clostridium sp. CAG:557 RepID=R6GTV7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23215.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2270_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9722..10135)
DNA (414bp) protein (138aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EDO61942.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EDO61942.1};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminoco
Calcium-translocating P-type ATPase, PMCA-type n=2 Tax=Clostridium RepID=A7VSB2_9CLOT
P-type HAD superfamily ATPase
Displaying 8 items

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