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SCNpilot_BF_INOC_scaffold_2658_11

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(12352..12852)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI00028977EB similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 166.0
  • Bit_score: 136
  • Evalue 3.20e-29
RNA polymerase {ECO:0000313|EMBL:KGR81859.1}; TaxID=1220589 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus odysseyi 34hs-1 = NBRC 100172.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 162.0
  • Bit_score: 146
  • Evalue 3.30e-32
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 159.0
  • Bit_score: 129
  • Evalue 6.50e-28

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Taxonomy

Lysinibacillus odysseyi → Lysinibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 501
ATGGTTGAAAAGGTGAAGCTGGCCCAAGGGGGGGATTCACAAGCCTTTACCGATTTGTTCATAATGTACCAAGAGTTGATTTACAGCATTGCATTTACTTATGTAAAAACAAAGGAAAATGCGTTGGATGTGGTCCAGCAAACTGCATATCATACATATTTAAAAATCGAAAGGTTAAGAAAGCCGGAGAATTTCAAAGCATGGCTTTGTAAAATCGCCATACACAACGCCATGGATTTTTTAAGGAAAAACAAGAAGTATGATTTGAATAACGGTATAATTGATGAAATAGCGGAAAAAAAAGAGGATGAAGAAATGCAGTTTTTAGACCTGCTGCTTCAACTCGAAGAAAAAGAAAAGACGGTTGTCTATTACAAAATTTATTTTGAATATACATTCATACAGGTTGCAGGGATCATGAAAATCCCGGAGAACACCGTGAAATCTATCTATTACAGAGCGCTTGAGAAATTAAGGTGCAGAGAGGAGCTGTTATTGTGA
PROTEIN sequence
Length: 167
MVEKVKLAQGGDSQAFTDLFIMYQELIYSIAFTYVKTKENALDVVQQTAYHTYLKIERLRKPENFKAWLCKIAIHNAMDFLRKNKKYDLNNGIIDEIAEKKEDEEMQFLDLLLQLEEKEKTVVYYKIYFEYTFIQVAGIMKIPENTVKSIYYRALEKLRCREELLL*