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SCNpilot_BF_INOC_scaffold_4032_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(1095..2741)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=2 Tax=root RepID=D4MHY3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 551.0
  • Bit_score: 544
  • Evalue 1.30e-151
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 551.0
  • Bit_score: 544
  • Evalue 3.70e-152
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL33366.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubact similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 551.0
  • Bit_score: 544
  • Evalue 1.80e-151

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Taxonomy

[Eubacterium] siraeum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1647
ATGGATTATGACGATTGTATGCTACAGTTGAATGATAAGGTGCTTTTAGACAAGCTGTACGGTTTTGCGTATAAGCGCTGTAACAGTGCGGGTGAAGCGGAGGATTTGTGTTCGGATATTTTGGTGTCTGTTCTGTCAACGCTTCGCAAAAACCCTGAAATAACGCACTTTCACGGACTTTTGTGGACGATTGCGCACCGGGTGTATGCCGATTTTTGTGAGAAACGGAAGAAGCACACATTGATACAGCCTGACGAGTTAACGGATTGCTTACATGTTTCGGATAACAATGTGGATACGTTTTTGGAAACCGAAGAGGACCGAAGGCTGGTGCAAAGCATTCTGCGAGAGATATCCTTTTTGGCAAAAATCTATCGGGATGTGATGGTATTTTATTACCTTGACAGGCTGCCTGTTTCCGCCATTGCAAAAAAGCTCTGCATCAGCGAAACCGCCGTGAAGCAACGATTGTTTTCCGCCCGCAACACAGTGAAAGAAGAGGTTCTGAAAATGGATAAACAATATACATTAAAACCCGTTGATATCGCCTTTATCGGCACGGGAAACCCCGTGGGCAACGATCCCCGAAGTAAGGCGGAACGGGTGCTTTCCAAAAACGTGGTGTATCTTTGCAAAAAAGAAGCCTTGTCGGCAAAAGAAATTTCGGAAAAGCTGGGCGTTCCCATGCCTTTTATTGAGGATGAACTGGATATTCAACTAAAAGGCGAAAACGGAACCTATGGACTGTTACGAAAGCTGGAGAACGGCAAATATATCGCAAACGCTATCCTTCTGGATTTAGACGAGCTGGAAGCAGGGACAAAGGTTTATAAAAAGCACTTAGTCGCTTTCTGCCAAGGAATCAAACAAGCGGTGGAGGAAAACCGGAACCAAATTCTTTCCTTCCCTTTCCTCAGCCGACAGAAAGATCCGGCGTTTCTTTTATGGTCACTGATTTCGGGCATTGTCTGGGAACTGGACGGTGCCGTTAAGGAGGTTTTAAAAAGCAAATACTTCAAAGATACTGAAACCATCCGACGGGATTTCACATTAATCGGCATTGCAGTAAAACCGGAGGAAACACTGAACATCGGATTCTATGGCTGCGACGGCATCAAATCACCCATCGGCGGGCAAAACATATGCGGTTATTCTTCCGTGTTCGTTTCCAATGTTTACGGTGCGAAGCTGGAAAAGCATTTTTCCTGCGGACATAATATTTCGAGTGACCCCTTGCTACTCATTACCATTCGTTCCATCGGCGGGTTGGATATAAACAGCCTGTCCCAGCAGGAAAAAGAGTATGCCGCCAAGGCGGTCGAATGCGGTTATCTGCAGGTGGACAGGGAAACATTGACACCCAAAATTATTGTGATAGAGGAAGCAAGTAAGAATGATTTTTACCGGTTACTTCCGGACTACAGCCCTTTCCTCAAAGACCTTGCCGAAACAATTGCCGAGGATCTATATCAGCTTATCAAGCAATATGTTCCCAAGCATCTCATCCAGGAGTATCCCATGTATAGTATGGCATCCAGCATCCGCATTTTGTACGAAGTGATCGAGTATTGCATTGCAGAAGGGATTTTGACCACACCAACGAATCAATTAAATGCGGAAGGTGTTGTTATGGTTGTGAAGAAATAA
PROTEIN sequence
Length: 549
MDYDDCMLQLNDKVLLDKLYGFAYKRCNSAGEAEDLCSDILVSVLSTLRKNPEITHFHGLLWTIAHRVYADFCEKRKKHTLIQPDELTDCLHVSDNNVDTFLETEEDRRLVQSILREISFLAKIYRDVMVFYYLDRLPVSAIAKKLCISETAVKQRLFSARNTVKEEVLKMDKQYTLKPVDIAFIGTGNPVGNDPRSKAERVLSKNVVYLCKKEALSAKEISEKLGVPMPFIEDELDIQLKGENGTYGLLRKLENGKYIANAILLDLDELEAGTKVYKKHLVAFCQGIKQAVEENRNQILSFPFLSRQKDPAFLLWSLISGIVWELDGAVKEVLKSKYFKDTETIRRDFTLIGIAVKPEETLNIGFYGCDGIKSPIGGQNICGYSSVFVSNVYGAKLEKHFSCGHNISSDPLLLITIRSIGGLDINSLSQQEKEYAAKAVECGYLQVDRETLTPKIIVIEEASKNDFYRLLPDYSPFLKDLAETIAEDLYQLIKQYVPKHLIQEYPMYSMASSIRILYEVIEYCIAEGILTTPTNQLNAEGVVMVVKK*