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SCNpilot_BF_INOC_scaffold_4032

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4032_1
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

160..1044
DNA (885bp) protein (295aa)
Transcriptional regulator with cupin sensor, AraC family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNR2_CELLD
Transcriptional regulator {ECO:0000313|EMBL:GAF07689.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_4032_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1095..2741)
DNA (1647bp) protein (549aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=root RepID=D4MHY3_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL33366.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubact
SCNpilot_BF_INOC_scaffold_4032_3
unknown

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comp(2897..3175)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4032_4
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3359..3574
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Lysinibacillus boronitolerans RepID=UPI0003033BFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHN22027.1}; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;"
SCNpilot_BF_INOC_scaffold_4032_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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3594..3806
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XDV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY94073.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_4032_6
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3831..4046
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000376892D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHN22027.1}; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;"
SCNpilot_BF_INOC_scaffold_4032_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4587..5123)
DNA (537bp) protein (179aa)
Fibronectin-binding protein n=2 Tax=Clostridium RepID=A7VVS0_9CLOT
Fibronectin-binding protein {ECO:0000313|EMBL:EDO61070.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM
fibronectin-binding A domain-containing protein
SCNpilot_BF_INOC_scaffold_4032_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5104..5820)
DNA (717bp) protein (239aa)
fibronectin-binding protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037962C0
Putative fibronectin-binding protein {ECO:0000313|EMBL:EJF40150.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9
hypothetical protein
SCNpilot_BF_INOC_scaffold_4032_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6263..7030)
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1263068 species="Bacteri
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium leptum CAG:27 RepID=R6N1N6_9CLOT
conserved hypothetical protein TIGR00486
SCNpilot_BF_INOC_scaffold_4032_10
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7027..7719)
DNA (693bp) protein (231aa)
PF04816 family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H3R8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24045.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_4032_11
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7808..8188)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U7Q0_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU28173.1}; Flags: Precursor;; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligene
SCNpilot_BF_INOC_scaffold_4032_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8190..8870)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R3Y1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39884.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
SCNpilot_BF_INOC_scaffold_4032_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9082..10152)
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Clostridium leptum CAG:27 RepID=R6P371_9CLOT
SCNpilot_BF_INOC_scaffold_4032_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10295..10888)
DNA (594bp) protein (198aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000
leuA1; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003638400
SCNpilot_BF_INOC_scaffold_4032_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10911..11765)
DNA (855bp) protein (285aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase, yeast type (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MDY4_9FIRM
SCNpilot_BF_INOC_scaffold_4032_16
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(12112..12663)
DNA (552bp) protein (184aa)
FAD dependent oxidoreductase Tax=GWF2_Lentisphaerae_49_21_curated
Glucose-inhibited division protein A id=2852342 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
tat (twin-arginine translocation) pathway signal sequence
SCNpilot_BF_INOC_scaffold_4032_17
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12629..13420)
DNA (792bp) protein (264aa)
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AHV96375.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
Glucose-inhibited division protein A id=4037809 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
SCNpilot_BF_INOC_scaffold_4032_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13481..14056)
DNA (576bp) protein (192aa)
glycerate dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI000382DD52
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:CDC08808.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; en
Displaying 18 items

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