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SCNpilot_BF_INOC_scaffold_4966_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(2018..2761)

Top 3 Functional Annotations

Value Algorithm Source
Capsular exopolysaccharide family n=1 Tax=Clostridium sp. CAG:217 RepID=R6J119_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 231.0
  • Bit_score: 213
  • Evalue 2.40e-52
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDB51386.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="C similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 231.0
  • Bit_score: 213
  • Evalue 3.30e-52
capsular exopolysaccharide family protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 223.0
  • Bit_score: 180
  • Evalue 6.30e-43

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Taxonomy

Clostridium sp. CAG:217 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 744
ATGGCTTTTTTGAAAAAAAATAAAACACCATCAACGGTAGCGCCCAGACGTGACAGTATTGCCCGTCCGAAAAGCGACATCAGTGTTGTGGAAGCATACAGGACCATCCGTACCAACTTCATGTTTGCAATCAATAAAAAGGATAAATGCAAGAAGATTATTTTCACAAGCCCTGTTCCCCGTGACGGGAAAAGTACCACTTGTGTGAATCTGGGTATCTCCCTCGCTCAAATTGACGCGAAAGTTCTTTTGATCGACTGTGATATGAGAAAACCTCGTATTCATAAATTCTTTAATTGTGACAATACGCCCGGTCTTTCCAATGTTTTGGGCGGTTTCAATGAACTATCCGAAACCATCAAGCAGACGGATCATCATAATTTATTCATTATTCCTTCGGGCATCATACCGCCGAACCCTGCCGAGCTTTTGTCCGGACCTCGGATGGCTAACATCATGGAAGAGCTGGAGACGATGTTTGACTTTATTTTGGTCGATACACCGCCCTGTAACGTTGTTTCCGATGCACTTTTGCTTACAAAAATTTGCGACGGTGTTATTTTAATCGTAAAGCAGAGTGTCACAATTCACCCTGATTTGACCCGTTGTATCAAAAGCTTGGAGTTTATAAACGCAGATATTCTCGGAATTATACTGAATGAGGCTACGCAAAACAGAAAATATACCTATAAAAAGTATAAGTATGGAGAGTACAGATATGGATATAATTACTCGTCCTATTGA
PROTEIN sequence
Length: 248
MAFLKKNKTPSTVAPRRDSIARPKSDISVVEAYRTIRTNFMFAINKKDKCKKIIFTSPVPRDGKSTTCVNLGISLAQIDAKVLLIDCDMRKPRIHKFFNCDNTPGLSNVLGGFNELSETIKQTDHHNLFIIPSGIIPPNPAELLSGPRMANIMEELETMFDFILVDTPPCNVVSDALLLTKICDGVILIVKQSVTIHPDLTRCIKSLEFINADILGIILNEATQNRKYTYKKYKYGEYRYGYNYSSY*