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SCNpilot_BF_INOC_scaffold_4966

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4966_1
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..499)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQ52_CLOPH
Uncharacterized protein {ECO:0000313|EMBL:KEZ88147.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_4966_2
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(591..1301)
DNA (711bp) protein (237aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FYH2_9CLOT
ABC transporter {ECO:0000313|EMBL:KEZ88146.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
ABC transporter
SCNpilot_BF_INOC_scaffold_4966_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1294..2043)
DNA (750bp) protein (250aa)
PHP domain protein {ECO:0000313|EMBL:EEG31183.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEG31183.1};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;
PHP domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBA7_9CLOT
PHP domain-containing protein
SCNpilot_BF_INOC_scaffold_4966_4
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2018..2761)
DNA (744bp) protein (248aa)
Capsular exopolysaccharide family n=1 Tax=Clostridium sp. CAG:217 RepID=R6J119_9CLOT
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDB51386.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="C
capsular exopolysaccharide family protein
SCNpilot_BF_INOC_scaffold_4966_5
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(2790..3461)
DNA (672bp) protein (224aa)
Chain length determinant protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BG73_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:CDD64138.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
lipopolysaccharide biosynthesis protein
SCNpilot_BF_INOC_scaffold_4966_6
Bacillus sp. TS-2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3605..4348)
DNA (744bp) protein (248aa)
oxidoreductase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028A359F
Putative dehydrogenase {ECO:0000313|EMBL:GAF63411.1}; TaxID=1450694 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TS-2.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_4966_7
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4318..4698)
DNA (381bp) protein (127aa)
oxidoreductase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028A359F
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EMS72928.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostri
dehydrogenase
SCNpilot_BF_INOC_scaffold_4966_8
Bacillus sp. TS-2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4712..5560)
DNA (849bp) protein (283aa)
Sugar phosphate isomerase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VPI6_CLOSH
Putative isomerase {ECO:0000313|EMBL:GAF63412.1}; TaxID=1450694 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TS-2.;"
xylose isomerase domain-containing protein TIM barrel
SCNpilot_BF_INOC_scaffold_4966_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5553..6317)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI0003808EA5
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:CDC09311.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental
xylose isomerase
SCNpilot_BF_INOC_scaffold_4966_10
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6330..7703)
DNA (1374bp) protein (458aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
Uronate isomerase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VRR1_THESW
uronate isomerase
SCNpilot_BF_INOC_scaffold_4966_11
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7761..8042)
DNA (282bp) protein (94aa)
KHG/KDPG aldolase KdgA {ECO:0000313|EMBL:AGC67820.1}; EC=4.1.2.14 {ECO:0000313|EMBL:AGC67820.1};; EC=4.1.3.16 {ECO:0000313|EMBL:AGC67820.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; C
Eda n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VID9_CLOSH
SCNpilot_BF_INOC_scaffold_4966_12
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8402..9244)
DNA (843bp) protein (281aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88137.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_BF_INOC_scaffold_4966_13
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9520..10401
DNA (882bp) protein (294aa)
AraC-type DNA-binding domain-containing protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FMY6_9CLOT
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:EMS73600.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Cl
helix-turn-helix domain-containing protein
SCNpilot_BF_INOC_scaffold_4966_14
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

10463..11125
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YU45_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI47356.1}; TaxID=1054217 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon BRNA1.;"
SCNpilot_BF_INOC_scaffold_4966_15
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11159..11365
DNA (207bp) protein (69aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X8L7_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDD02712.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Rum
2-oxoacid:acceptor oxidoreductase subunit delta
SCNpilot_BF_INOC_scaffold_4966_16
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11390..12454
DNA (1065bp) protein (355aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase thiamine diP-binding domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I718_9FIRM
Pyruvate flavodoxin/ferredoxin oxidoreductase thiamine diP-binding domain protein {ECO:0000313|EMBL:CDB41206.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
SCNpilot_BF_INOC_scaffold_4966_17
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

12454..12612
DNA (159bp) protein (53aa)
ABC-type transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BDI0_9FIRM
ABC-type transport system ATPase component {ECO:0000313|EMBL:CDD63491.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
ABC transporter ATPase
Displaying 17 items

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