ggKbase home page

SCNpilot_BF_INOC_scaffold_530_17

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(10992..11321)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DJU6_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 102.0
  • Bit_score: 88
  • Evalue 5.10e-15
Helix-turn-helix family protein {ECO:0000313|EMBL:EQF26820.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 102.0
  • Bit_score: 88
  • Evalue 7.10e-15
regulatory protein similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 99.0
  • Bit_score: 84
  • Evalue 1.60e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 330
ATGTTTGAAGTTAATATTGGAAGACGTATTAGAGAACAGAGAAACAAGAAACATTTAACTATTGAAAAATTTGCAGAAGTCGTGAATCTTAGTGCAGTTTATGTAGGAGAAATCGAAAGAAACGAAAAAATGCCCAGTCTTTTAACTTTTATAAATATTATCAATGCATTGGGATTATCACCGGACATTTGTCTATGCGATATGGTTGATACGGGTAAAACTCACGTTTTTAATGAAATAACAGAAATGATGAAAGATTTATCACCTGAACAGGTATGTTATATAAGAGATATGATAAAAGTAACTATTAAATATTTTAAAAACCATTAA
PROTEIN sequence
Length: 110
MFEVNIGRRIREQRNKKHLTIEKFAEVVNLSAVYVGEIERNEKMPSLLTFINIINALGLSPDICLCDMVDTGKTHVFNEITEMMKDLSPEQVCYIRDMIKVTIKYFKNH*