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SCNpilot_BF_INOC_scaffold_530

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_530_1
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

3..413
DNA (411bp) protein (137aa)
Type II secretion system protein E n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TVD3_9FIRM
Type II secretion system protein E {ECO:0000313|EMBL:CDC77413.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
SCNpilot_BF_INOC_scaffold_530_2
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

410..856
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UBD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77411.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_530_3
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

986..2371
DNA (1386bp) protein (462aa)
Pyruvate carboxyltransferase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TIF9_CALOO
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ADL41791.1}; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicell
SCNpilot_BF_INOC_scaffold_530_4
unknown

Not on your lists

3893..4183
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_5
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4197..4466
DNA (270bp) protein (90aa)
recombinase n=1 Tax=Paenibacillus elgii RepID=UPI000248CA00
recombinase
Resolvase domain-containing protein {ECO:0000313|EMBL:ABN51243.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium ther
SCNpilot_BF_INOC_scaffold_530_6
unknown

Not on your lists

4633..4821
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_7
unknown

Not on your lists

4823..4960
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_8
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

5040..5411
DNA (372bp) protein (124aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=GWF2_Clostridiales_36_10_curated
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase id=3085961 bin=GWF2_Clostridiales_36_10 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
SCNpilot_BF_INOC_scaffold_530_9
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5408..5581
DNA (174bp) protein (58aa)
Transposase IS4 family protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RXZ4_THEOJ
Transposase {ECO:0000313|EMBL:KHM53130.1}; Flags: Fragment;; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticu
transposase IS4 family protein
SCNpilot_BF_INOC_scaffold_530_10
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5620..5985
DNA (366bp) protein (122aa)
Putative transposase for insertion sequence element n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KT35_OSCVS
putative transposase for insertion sequence element
Putative transposase for insertion sequence element {ECO:0000313|EMBL:BAK97687.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Osc
SCNpilot_BF_INOC_scaffold_530_11
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6663..7097
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002DF8062
Uncharacterized protein {ECO:0000313|EMBL:ETD26232.1}; TaxID=1073366 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens CC14M.;"
coenzyme F420-reducing hydrogenase subunit beta
SCNpilot_BF_INOC_scaffold_530_12
unknown

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7075..7419
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_13
unknown

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7416..7595
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_14
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7732..8397
DNA (666bp) protein (222aa)
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:EMS69223.1}; EC=2.7.8.- {ECO:0000313|EMBL:EMS69223.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ru
4'-phosphopantetheinyl transferase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FL36_9CLOT
hypothetical protein
SCNpilot_BF_INOC_scaffold_530_15
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8716..9816
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002DF8062
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABR46447.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alka
SCNpilot_BF_INOC_scaffold_530_16
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9874..10926
DNA (1053bp) protein (351aa)
Putative uncharacterized protein id=4173991 bin=GWA2_Bacteroidetes_A19_40_15 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWA2_Bacteroidetes_40_15_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_530_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10992..11321)
DNA (330bp) protein (110aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DJU6_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQF26820.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
regulatory protein
SCNpilot_BF_INOC_scaffold_530_18
unknown

Not on your lists

11516..11830
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_19
unknown

Not on your lists

11961..12329
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_20
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12343..13572
DNA (1230bp) protein (410aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHD8_9CLOT
SCNpilot_BF_INOC_scaffold_530_21
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13551..14099
DNA (549bp) protein (183aa)
Acetyltransferase, including N-acetylase of ribosomal protein n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WDN0_BACCE
Acetyltransferase, including N-acetylase of ribosomal protein {ECO:0000313|EMBL:EEL48760.1}; TaxID=526986 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus gro
RimL2; acetyltransferase
SCNpilot_BF_INOC_scaffold_530_22
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14135..16045
DNA (1911bp) protein (637aa)
1,3--beta-D-glucan 3-glucanohydrolase n=1 Tax=Cohnella laeviribosi RepID=UPI0003605F27
beta-glucanase/beta-glucan synthetase
Beta-glucanase/beta-glucan synthetase {ECO:0000313|EMBL:AGA57343.1}; Flags: Precursor;; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="The
SCNpilot_BF_INOC_scaffold_530_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16078..17178
DNA (1101bp) protein (367aa)
WfaX n=2 Tax=Clostridium butyricum RepID=B1QTB2_CLOBU
WfaX {ECO:0000313|EMBL:EEP55753.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Polysaccharide pyruvyl transferase.
SCNpilot_BF_INOC_scaffold_530_24
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17208..19082
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00036E670A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ51315.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
SCNpilot_BF_INOC_scaffold_530_25
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19083..20903
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI000363A78F
Uncharacterized protein {ECO:0000313|EMBL:CDD04276.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
subtilin ABC transporter
SCNpilot_BF_INOC_scaffold_530_26
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20926..21879
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JAT6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY67383.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
SCNpilot_BF_INOC_scaffold_530_27
unknown

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21883..22812
DNA (930bp) protein (310aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_28
unknown

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22888..23058
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_530_29
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23418..24515
DNA (1098bp) protein (366aa)
3-dehydroquinate synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FAE2
3,7-dideoxy-D-threo-hepto-2, 6-diulosonate synthase {ECO:0000313|EMBL:GAE86733.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source=
3-dehydroquinate synthase
SCNpilot_BF_INOC_scaffold_530_30
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24539..25285
DNA (747bp) protein (249aa)
deoxyribose-phosphate aldolase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FAEC
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000313|EMBL:GAE86718.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sourc
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
Displaying items 1-30 of 102 in total

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