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SCNpilot_BF_INOC_scaffold_530_54

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 45727..46188

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8C4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 154.0
  • Bit_score: 134
  • Evalue 6.60e-29
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog {ECO:0000313|EMBL:CCZ05267.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 154.0
  • Bit_score: 134
  • Evalue 9.30e-29
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 148.0
  • Bit_score: 133
  • Evalue 5.40e-29

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Taxonomy

Eubacterium sp. CAG:603 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 462
ATGTTCAATGATAAAAGTCCTTATAAAATTCGCATAAAAAAAACAAATAACAGTAACCAATACTTTGTATCTTTTATTGATGGTCAGGACACATTTCAAGAACTGGAGTTATCCCATTCAATGTTTATAGAAATACATAAAATAATAAAAGACATTCGCAATCTGAAAAGATCAGATGAGAGGCATATTGAAAAATTTGATTTATCAGATGAGCAACTTTTACATCGAGCATTTAATCCACCTATGAGCATTGAAGATGAAGCAATCATAATGGAAAGTATGAAAACACTTAATGAAGCACTTTCAAGATTGCCGGAAATTCAAAAGCGACGGGTTATTCTTTACTATAAAAATCATTTGACCTTTGAACAAATTGCAGAAATGGAGGGATGTAAACACCCTGCGGTGATTAAATCAGTAAATCAAGCATTGAAAAAAATTAAAAAATATTTTGACTTATAG
PROTEIN sequence
Length: 154
MFNDKSPYKIRIKKTNNSNQYFVSFIDGQDTFQELELSHSMFIEIHKIIKDIRNLKRSDERHIEKFDLSDEQLLHRAFNPPMSIEDEAIIMESMKTLNEALSRLPEIQKRRVILYYKNHLTFEQIAEMEGCKHPAVIKSVNQALKKIKKYFDL*