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SCNpilot_BF_INOC_scaffold_530_81

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 68429..69127

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037CDBAC similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 231.0
  • Bit_score: 320
  • Evalue 1.30e-84
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 228.0
  • Bit_score: 317
  • Evalue 3.10e-84
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADL05142.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 228.0
  • Bit_score: 317
  • Evalue 1.50e-83

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Taxonomy

[Clostridium] saccharolyticum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 699
TTGCCGATTAACAAAAATATATTGGTAGTGGATGATGAGCCGAAGATCCTGGATGCAGTTGCTTCTTTTATGATAACCAAAGGGTATTGTGTATTCGAGGCAGAAAACGGATATAGCGCACTGGAGCTTTTTGAGAAGCATAATGTGTCATTGGTTATTTTAGACCTTATGCTTCCGGACATTTCAGGAGAGCAGGTTTGCGCTGCCATCCGGAAAAAATCACGTGTTCCTATCATCATGCTAACTGCAAAATCGGAGGAAGCCAGTCAGTTGAAAGGTCTCAATATGGGTGCGGATGATTACATTGTAAAACCGTTCAGCCTTAAATTACTGGCTGCCCGTGTGGAAGTTGTGTTACGTAGAGCAGAAAATGATCTTGTCCCCCTTGTCATCAAAAACTCATGGCATCATGGTGATTTGGTGGTGGATTTTGAAAAAAACATTTTTTGCAAAAAGGGGGTAGAGGTGAATTTAACCCCAAGCGAACGTAAAATTCTCTCTGCGCTTATGAAATATCCCGGGAAGGTGTTTACACGGGATGAGCTGATTGAAATTGCCTTTCACGGTATATTCGAGGGATATGACAGAACAATAGATACACATATCAAAAATCTACGGCAAAAAATTGAGGATAACAGCAAAGAGCCTGTCTATGTTCTGACAATACACGGGCTGGGATATAAGTTTGGAGGAGATTGA
PROTEIN sequence
Length: 233
LPINKNILVVDDEPKILDAVASFMITKGYCVFEAENGYSALELFEKHNVSLVILDLMLPDISGEQVCAAIRKKSRVPIIMLTAKSEEASQLKGLNMGADDYIVKPFSLKLLAARVEVVLRRAENDLVPLVIKNSWHHGDLVVDFEKNIFCKKGVEVNLTPSERKILSALMKYPGKVFTRDELIEIAFHGIFEGYDRTIDTHIKNLRQKIEDNSKEPVYVLTIHGLGYKFGGD*