ggKbase home page

SCNpilot_BF_INOC_scaffold_715_17

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(18419..19333)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TN59_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 303.0
  • Bit_score: 460
  • Evalue 1.40e-126
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 303.0
  • Bit_score: 460
  • Evalue 3.90e-127
Helix-turn-helix-domain containing protein, AraC type {ECO:0000313|EMBL:ABR47627.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alka similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 303.0
  • Bit_score: 460
  • Evalue 1.90e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alkaliphilus metalliredigens → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 915
ATGGAGCGATGGGAAACAATTGATGCGGTACAGCGGATGCAGGATTACATTGAAAGCCATATCAGCGAGCCGATTACCCAAAACGGTCTTGCAAGAGCGGCAGGATACTCTCAGTGGCATTCCATGCGGATGTTCAAGGAACTGATGGGAAAAACGCCATTTGAATATATTCGGGCGTTACGGCTGACCAAAGCGGCCTTGCTGCTTCGGGACAACAAACCAAAAATCATTGACGTTGCCTTTGATTTTGTGTTTGATTCCCATGAAGGGTTTACCCGGGCCTTCTATAAGCAGTTTGGGGTTTCTCCCAAGCGGTACAGCAAACAGCCCGAACCGATTCAACTGTTTATCCCATACAGCATCCGCGGTTATTACCTCACAATTCGAAAAGGAGAGAAGACCATGCCGGAAAAGAAGAACAGCACCGTTTTTGTGCAAGTAGTGGAACGACCAGAGAGAAAGCTGATTTTAAAAAGAGGGGTCAAAGCCGAGGAATATTTTGCATACTGCGAAGAGGTGGGTTGTGAGGTTTGGGGGATGCTGGAAAGCGTGAAAGAAGCGCTGTATGAGCCCATTGGCATGTGGCTGCCGCCAAACATGGTCACGCCGGGAACATCGGTATATGCCCAGGGTGTTGAGGTTCCTTTTGATTATAGCGGAAAAGTACCGGAGGGGTATGATATCATCGATCTGCCCGAATGCAAAATGCTGGTGTTCCAAGGCGAGCCTTTTGACGATGAAGAATTCGGCAATGCCATTGGTGAGCTTTGGGAAGTCATGAAACGCTACAAGCCCGAGATTTACGGATACCGCTGGGAAGACCGGGACGCACCCAGATTCCAGCTGGCTCCCATGGGTTACAGGGGCTATATCGAGGGAAGACCCGTCAGACAAATCAATTCATCTGCAGAGTAA
PROTEIN sequence
Length: 305
MERWETIDAVQRMQDYIESHISEPITQNGLARAAGYSQWHSMRMFKELMGKTPFEYIRALRLTKAALLLRDNKPKIIDVAFDFVFDSHEGFTRAFYKQFGVSPKRYSKQPEPIQLFIPYSIRGYYLTIRKGEKTMPEKKNSTVFVQVVERPERKLILKRGVKAEEYFAYCEEVGCEVWGMLESVKEALYEPIGMWLPPNMVTPGTSVYAQGVEVPFDYSGKVPEGYDIIDLPECKMLVFQGEPFDDEEFGNAIGELWEVMKRYKPEIYGYRWEDRDAPRFQLAPMGYRGYIEGRPVRQINSSAE*