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SCNpilot_BF_INOC_scaffold_715_28

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(35862..36935)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFC0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 337.0
  • Bit_score: 436
  • Evalue 3.20e-119
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colih similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 337.0
  • Bit_score: 436
  • Evalue 4.50e-119
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 336.0
  • Bit_score: 427
  • Evalue 4.20e-117

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Taxonomy

Anaerotruncus colihominis → Anaerotruncus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1074
TTGAACATTGAGAGAGAAAAGGGCGAGATATTCGAGGTCGATTTAGACACCGACAGTTTCGTGCTGCCGGAAGCCGAGGATACCTTTCATGAGGAAATTGAGGACGAGCTGGAGGAAGATGAAGCATTTGAAAATGCCATCGAGACACCGCTTCTGGATTTGGATTTAATTGAAGAGCCGGATATCGAGGAATTACAGATTGATATCGTTACCCCGGAAGAAATCGCTGACGCTTTGATTGTCAATAATATTGCTATCAATGACCCGGTGAAGCTTTACTTGAAAGAAATCGGCCGAGTGCCGCTGTTAAGCTCGGATGAAGAGGTCACACTGGCTACCAAAATCAGCGAGGGTGACAGAAGAGCAAAGCAGCGTCTCACCGAAGCCAATTTGCGTCTGGTGGTCAGCATTGCCAAACGCTATGTGGGTCGTGGCATGCATTTTCTCGATCTCATACAGGAAGGCAATGTGGGTCTCATCAAAGCCGTTGAGAAATTTGACCATACCAAGGGTTTTAAATTTTCCACTTATGCTACCTGGTGGATTCGACAGGCCATTACCCGTGCCATCGCCGACCAGGCGAGAACCATCCGTATCCCTGTGCATATGGTGGAAACCATCAACCGTCTGAAAAAGGTGCAAAGCCAGCTGCTTCACGAAAACGGCAGAGAGCCCACAGAAGAGCAAATCGCGGATGCCATGGATTTGCAGGTGGACCGTGTGCGTGAAATCATGCGGGTGGCACAGGAGCCTGTGTCCATGGAAACCCCCATCGGCCCCGAAGAGGACAGCCGTTTGATGGATTTTATCCGGGATGAGGACGCATTGGCACCGGACGAAGCGGCGCTGAAAACCATCACCAACGAAGACATTGATCAGGTGCTGAAAACACTGACACCCAGGGAGGAAGAGGTCATCCGTCTGCGCTTTGGCTTGCAGGACGGACGCTGTCACACCCTTGAAGAAGTGGGAACGGCGTTTCATGTTACCCGTGAGCGGATCCGTCAGATCGAGGCGAAGGCGCTGCGGAAATTGCGCCATCCTGTCAGAAGCAATAAATTCAAGGATAAATAA
PROTEIN sequence
Length: 358
LNIEREKGEIFEVDLDTDSFVLPEAEDTFHEEIEDELEEDEAFENAIETPLLDLDLIEEPDIEELQIDIVTPEEIADALIVNNIAINDPVKLYLKEIGRVPLLSSDEEVTLATKISEGDRRAKQRLTEANLRLVVSIAKRYVGRGMHFLDLIQEGNVGLIKAVEKFDHTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRLKKVQSQLLHENGREPTEEQIADAMDLQVDRVREIMRVAQEPVSMETPIGPEEDSRLMDFIRDEDALAPDEAALKTITNEDIDQVLKTLTPREEEVIRLRFGLQDGRCHTLEEVGTAFHVTRERIRQIEAKALRKLRHPVRSNKFKDK*