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SCNpilot_BF_INOC_scaffold_1331

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1331_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..279)
-----------------
DNA (279bp)
protein (93aa)
Aldehyde dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFA2_9SPHN
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CCA90977.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
SCNpilot_BF_INOC_scaffold_1331_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

520..810
-----------------
DNA (291bp)
protein (97aa)
Putative IS3 family transposase, IS150 group, OrfAB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJN3_RHITR
putative IS3 family transposase, IS150 group, OrfAB
Putative IS3 family transposase, IS150 group, OrfAB {ECO:0000313|EMBL:AGB70309.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
SCNpilot_BF_INOC_scaffold_1331_3
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1326..1790
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8H629_CAUCN
hypothetical protein
Uncharacterized protein; TaxID=565050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain NA1000 / CB15N).;"
SCNpilot_BF_INOC_scaffold_1331_4
unknown

Not on your lists

comp(1764..2015)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1331_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2191..2595
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028807A5
Uncharacterized protein {ECO:0000313|EMBL:ENY82755.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_BF_INOC_scaffold_1331_6
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2997..4244
-----------------
DNA (1248bp)
protein (416aa)
short-chain dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5A46D
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EGY02394.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nit
short chain dehydrogenase/reductase family oxidoreductase
SCNpilot_BF_INOC_scaffold_1331_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4292..5548)
-----------------
DNA (1257bp)
protein (419aa)
Glucose / Sorbosone dehydrogenase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ61_9SPHN
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15618.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_BF_INOC_scaffold_1331_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5559..7754)
-----------------
DNA (2196bp)
protein (732aa)
TonB-dependent Receptor Plug domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ60_9SPHN
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15617.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_1331_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7797..9005)
-----------------
DNA (1209bp)
protein (403aa)
PepSY-associated TM helix family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ66_9SPHN
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15623.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
PepSY-associated TM helix domain-containing protein
SCNpilot_BF_INOC_scaffold_1331_10
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9304..9792)
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B79DAC
Uncharacterized protein {ECO:0000313|EMBL:EGY02407.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
hypothetical protein
SCNpilot_BF_INOC_scaffold_1331_11
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9999..11441
-----------------
DNA (1443bp)
protein (481aa)
amino acid permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5411E
Amino acid permease-associated region {ECO:0000313|EMBL:EGY02386.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source
amino acid permease-associated protein
SCNpilot_BF_INOC_scaffold_1331_12
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11497..12993
-----------------
DNA (1497bp)
protein (499aa)
aldehyde dehydrogenase (EC:1.2.99.3)
betaine-aldehyde dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B48E08
Aldehyde dehydrogenase {ECO:0000313|EMBL:EGY02387.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillu
SCNpilot_BF_INOC_scaffold_1331_13
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13034..14326)
-----------------
DNA (1293bp)
protein (431aa)
D-amino acid oxidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40C3E
FAD dependent oxidoreductase {ECO:0000313|EMBL:EGY02388.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrosp
FAD dependent oxidoreductase
SCNpilot_BF_INOC_scaffold_1331_14
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14341..14763)
-----------------
DNA (423bp)
protein (141aa)
endoribonuclease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6BEFD
Putative translation initiation inhibitor {ECO:0000313|EMBL:EBA06720.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sa
endoribonuclease L-PSP
SCNpilot_BF_INOC_scaffold_1331_15
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14800..15972)
-----------------
DNA (1173bp)
protein (391aa)
ornithine cyclodeaminase (EC:4.3.1.12)
ornithine cyclodeaminase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4F388
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:EGY02389.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" sourc
SCNpilot_BF_INOC_scaffold_1331_16
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16162..17163
-----------------
DNA (1002bp)
protein (334aa)
AraC family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3B1E2
Uncharacterized protein {ECO:0000313|EMBL:EGY02390.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
hypothetical protein
SCNpilot_BF_INOC_scaffold_1331_17
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17165..17527)
-----------------
DNA (363bp)
protein (121aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B60DC9
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15571.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_BF_INOC_scaffold_1331_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17555..18058)
-----------------
DNA (504bp)
protein (168aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B519D9
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15579.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_BF_INOC_scaffold_1331_19
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18110..18574)
-----------------
DNA (465bp)
protein (155aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B63823
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15578.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_BF_INOC_scaffold_1331_20
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18896..20296)
-----------------
DNA (1401bp)
protein (467aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6CB82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM32639.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_BF_INOC_scaffold_1331_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20613..21041
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6BFC6
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_BF_INOC_scaffold_1331_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21106..22260)
-----------------
DNA (1155bp)
protein (385aa)
beta-lactamase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5DAF1
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15573.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
SCNpilot_BF_INOC_scaffold_1331_23
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22577..22822
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZX9_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01360.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st
SCNpilot_BF_INOC_scaffold_1331_24
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22812..22988
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZX8_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01359.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st
SCNpilot_BF_INOC_scaffold_1331_25
unknown

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23144..23329
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1331_26
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23343..23570
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZX7_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01358.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st
SCNpilot_BF_INOC_scaffold_1331_27
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23741..25303
-----------------
DNA (1563bp)
protein (521aa)
Putative terminase large subunit n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZX6_OSCVS
Putative terminase large subunit {ECO:0000313|EMBL:BAL01357.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valerici
putative terminase large subunit rbh
SCNpilot_BF_INOC_scaffold_1331_28
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25902..27158
-----------------
DNA (1257bp)
protein (419aa)
Putative portal protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZG2_OSCVS
putative portal protein rbh
Putative portal protein {ECO:0000313|EMBL:BAL01354.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st
SCNpilot_BF_INOC_scaffold_1331_29
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27155..27844
-----------------
DNA (690bp)
protein (230aa)
Putative prohead protease n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZG1_OSCVS
putative prohead protease rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscill
SCNpilot_BF_INOC_scaffold_1331_30
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27864..29072
-----------------
DNA (1209bp)
protein (403aa)
phage major capsid protein, HK97 family
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:AHM55836.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidam
Phage major capsid protein, HK97 family id=4072756 bin=GWF2_Clostridiales_38_85 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Displaying items 1-30 of 43 in total

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