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SCNpilot_BF_INOC_scaffold_1431

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1431_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)
replicative DNA helicase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B56FED
DNA helicase {ECO:0000313|EMBL:AHE51699.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenen
DNA helicase
SCNpilot_BF_INOC_scaffold_1431_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(239..604)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB91_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEZ12872.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
SCNpilot_BF_INOC_scaffold_1431_3
unknown

Not on your lists

comp(783..992)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR22105.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
SCNpilot_BF_INOC_scaffold_1431_4
unknown

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comp(1079..1678)
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1431_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1733..2209)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C349
Uncharacterized protein {ECO:0000313|EMBL:EZP70746.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas pau
SCNpilot_BF_INOC_scaffold_1431_6
unknown

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comp(2305..2742)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1431_7
unknown

Not on your lists

comp(2742..3170)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1431_8
unknown

Not on your lists

comp(3163..3426)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1431_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3510..3902)
DNA (393bp) protein (131aa)
Uncharacterized protein family UPF0150 n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2U5_SPHCR
CopG family transcriptional regulator
CopG family transcriptional regulator {ECO:0000313|EMBL:AJP72942.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_BF_INOC_scaffold_1431_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4163..5539)
DNA (1377bp) protein (459aa)
integrase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BCE4
integrase family protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
integrase family protein
SCNpilot_BF_INOC_scaffold_1431_11
unknown

Not on your lists

comp(6171..6458)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1431_12
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6819..7649)
DNA (831bp) protein (277aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
protein involved in catabolism of external DNA n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036E6301
hypothetical protein
SCNpilot_BF_INOC_scaffold_1431_13
unknown

Not on your lists

comp(7907..9037)
DNA (1131bp) protein (377aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1431_14
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9377..10387
DNA (1011bp) protein (337aa)
CysB family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A58CA9
bacterial regulatory helix-turn-helix, lysR family protein
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AIP24768.1}; Cys regulon transcriptional activator {ECO:0000313|EMBL:ABC39046.1}; TaxID=271848 species="Bacteria; Proteoba
SCNpilot_BF_INOC_scaffold_1431_15
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10384..11355)
DNA (972bp) protein (324aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDI4_9SPHN
Serine O-acetyltransferase {ECO:0000313|EMBL:EGD57275.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
SCNpilot_BF_INOC_scaffold_1431_16
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11747..13828)
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HXN1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB16833.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
glycoside hydrolase
SCNpilot_BF_INOC_scaffold_1431_17
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14523..14822)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003453EB4
putative virulence-associated protein D
Putative virulence-associated protein D {ECO:0000313|EMBL:AFY60897.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (
SCNpilot_BF_INOC_scaffold_1431_18
unknown

Not on your lists

comp(14989..15204)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1431_19
Zavarzinella formosa, Zavarzinella, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15394..16746)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030E8297
SCNpilot_BF_INOC_scaffold_1431_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16866..17846)
DNA (981bp) protein (327aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDW6_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA26851.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetace
SCNpilot_BF_INOC_scaffold_1431_21
unknown

Not on your lists

comp(18656..19057)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1431_22
unknown

Not on your lists

19264..19353
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 22 items

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