ggKbase home page

SCNpilot_BF_INOC_scaffold_160

Search features with annotation key words

Displaying items 61-90 of 505 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_160_61
unknown

Not on your lists

comp(63659..64411)
DNA (753bp) protein (251aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_160_62
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64411..66186)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VR99_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ39337.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
SCNpilot_BF_INOC_scaffold_160_63
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66902..67366)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5E51C
Uncharacterized protein {ECO:0000313|EMBL:KIC60026.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_BF_INOC_scaffold_160_64
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67371..67856)
DNA (486bp) protein (162aa)
Putative ATPase n=1 Tax=Joostella marina DSM 19592 RepID=I3CAQ1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGN37083.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_65
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69249..70454)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3CAQ2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KHL04493.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_66
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70905..71537
DNA (633bp) protein (211aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacteriaceae RepID=UPI000366C2DC
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KGJ80788.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopku
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_67
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71926..72705)
DNA (780bp) protein (260aa)
Phosphate-transporting ATPase {ECO:0000256|SAAS:SAAS00042365}; EC=3.6.3.27 {ECO:0000256|SAAS:SAAS00042365};; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobac
phosphate ABC transporter ATP-binding protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036AA73E
phosphate import ATP-binding protein PstB
SCNpilot_BF_INOC_scaffold_160_68
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72726..73814)
DNA (1089bp) protein (363aa)
ABC transporter, permease protein id=7721051 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Phosphate ABC transporter permease {ECO:0000313|EMBL:KGJ80793.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense
ABC transporter permease
SCNpilot_BF_INOC_scaffold_160_69
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73814..74752)
DNA (939bp) protein (313aa)
ABC transporter, permease protein id=7721052 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Phosphate ABC transporter permease {ECO:0000313|EMBL:KFF60062.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;
pstC; phosphate ABC transporter permease
SCNpilot_BF_INOC_scaffold_160_70
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74848..75942)
DNA (1095bp) protein (365aa)
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;
Phosphate-binding protein PstS id=7721053 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
substrate-binding transport lipoprotein
SCNpilot_BF_INOC_scaffold_160_71
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76065..77006)
DNA (942bp) protein (314aa)
Putative MutT family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIH7_9ACTN
Putative MutT family protein {ECO:0000313|EMBL:EAR24952.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
NUDIX hydrolase
SCNpilot_BF_INOC_scaffold_160_72
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77003..79177)
DNA (2175bp) protein (725aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
ppk; hypothetical protein (EC:2.7.4.1)
Polyphosphate kinase id=7721055 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
SCNpilot_BF_INOC_scaffold_160_73
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79216..79488)
DNA (273bp) protein (91aa)
Response regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2YXX7_9MICO
Response regulator {ECO:0000313|EMBL:GAD35328.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
transcriptional regulatory protein
SCNpilot_BF_INOC_scaffold_160_74
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79936..80211
DNA (276bp) protein (92aa)
Hypothetical membrane protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BAY5_9MICO
Membrane protein {ECO:0000313|EMBL:AJW79892.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
hypothetical membrane protein
SCNpilot_BF_INOC_scaffold_160_75
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80238..80348
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIH3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR24948.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
SCNpilot_BF_INOC_scaffold_160_76
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80353..80985
DNA (633bp) protein (211aa)
fatty acid-binding protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B6EB4B
UPF0678 fatty acid-binding protein-like protein N136_02466 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Le
fatty acid-binding protein
SCNpilot_BF_INOC_scaffold_160_77
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81053..82141
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002891F4B
Glycine cleavage T-protein barrel domain protein {ECO:0000313|EMBL:ERK71189.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquati
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_78
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82224..83270
DNA (1047bp) protein (349aa)
Conserved membrane protein id=7721062 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KDP90842.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_79
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83281..84084)
DNA (804bp) protein (268aa)
methylase n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034C7B8F
Contig_101, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01966.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_80
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84123..84869
DNA (747bp) protein (249aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase id=7721070 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};;
phosphoglyceromutase
SCNpilot_BF_INOC_scaffold_160_81
unknown

Not on your lists

84985..85470
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_160_82
unknown

Not on your lists

85504..85704
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_160_83
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

85716..86030
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B4A2F0
Uncharacterized protein {ECO:0000313|EMBL:CDK00474.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_84
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86046..86336
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000371E317
Uncharacterized protein {ECO:0000313|EMBL:KHK99788.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_BF_INOC_scaffold_160_85
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86337..86747
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=2 Tax=Saccharomonospora azurea RepID=H8G4Y3_9PSEU
PIN domain protein, Putative toxin of TAS system
SCNpilot_BF_INOC_scaffold_160_86
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86772..87413)
DNA (642bp) protein (214aa)
PhoU family transcriptional regulator n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A2405
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
phoU; phosphate transport system regulator
SCNpilot_BF_INOC_scaffold_160_87
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87614..88768
DNA (1155bp) protein (385aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="
Two-component system, sensor protein id=7721078 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
two-component system sensor protein
SCNpilot_BF_INOC_scaffold_160_88
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88765..89448
DNA (684bp) protein (228aa)
Two-component system, regulatory protein id=7721079 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
XRE family transcriptional regulator {ECO:0000313|EMBL:AJW79883.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis su
putative two-component system response regulator
SCNpilot_BF_INOC_scaffold_160_89
actinobacterium acMicro-1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89484..90005)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B44EFF
Uncharacterized protein {ECO:0000313|EMBL:KGA06313.1}; TaxID=1504316 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_90
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90134..90616
DNA (483bp) protein (161aa)
CarD family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003656E3D
RNA polymerase-binding transcription factor CarD {ECO:0000313|EMBL:CDK01704.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacter
CarD family transcriptional regulator
Displaying items 61-90 of 505 in total

View Taxonomy