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SCNpilot_BF_INOC_scaffold_160

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Displaying items 1-30 of 505 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_160_1
unknown

Not on your lists

3..155
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_160_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

233..1606
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B34028
Uncharacterized protein {ECO:0000313|EMBL:ERK73619.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1616..2509)
DNA (894bp) protein (298aa)
N-acetylmannosamine kinase {ECO:0000313|EMBL:KJL34327.1}; EC=2.7.1.60 {ECO:0000313|EMBL:KJL34327.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;
Putative sugarkinase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W6B9_9MICO
ROK family protein
SCNpilot_BF_INOC_scaffold_160_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2506..3414)
DNA (909bp) protein (303aa)
ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B4ED74
Binding-protein-dependent transport permease {ECO:0000313|EMBL:EAR24128.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative ABC-type sugar transport system, permease component
SCNpilot_BF_INOC_scaffold_160_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3411..4322)
DNA (912bp) protein (304aa)
sugar ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B5CA8D
Binding-protein-dependent transport permease {ECO:0000313|EMBL:EAR24127.1}; Flags: Fragment;; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_BF_INOC_scaffold_160_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4393..5673)
DNA (1281bp) protein (427aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B78536
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EAR24759.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
extracellular solute-binding protein
SCNpilot_BF_INOC_scaffold_160_7
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5805..6839)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036FB06B
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AGL19999.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N9
SCNpilot_BF_INOC_scaffold_160_8
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6891..8447
DNA (1557bp) protein (519aa)
Peptidase id=7720976 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Peptidase {ECO:0000313|EMBL:KFF59118.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
slpE; peptidase
SCNpilot_BF_INOC_scaffold_160_9
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8464..9231)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003469FC1
gylR; glycerol operon regulatory protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_BF_INOC_scaffold_160_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9374..10117
DNA (744bp) protein (248aa)
Glycerol uptake facilitator, MIP channel n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIN2_9ACTN
Glycerol uptake facilitator, MIP channel {ECO:0000313|EMBL:EAR25007.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
glycerol uptake facilitator, MIP channel
SCNpilot_BF_INOC_scaffold_160_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10114..11109
DNA (996bp) protein (332aa)
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK {ECO:0000313|EMBL:KJL33169.1}; EC=2.7.-.- {ECO:0000313|EMBL:KJL33169.1};; TaxID=582680 species="Bacteria; Actinobacteria; M
dhaK; dihydroxyacetone kinase subunit DhaK (EC:2.7.1.-)
Dihydroxyacetone kinase subunit K n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KR71_9MICO
SCNpilot_BF_INOC_scaffold_160_12
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11132..11785
DNA (654bp) protein (218aa)
PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL {ECO:0000313|EMBL:KJL26299.1}; EC=2.7.-.- {ECO:0000313|EMBL:KJL26299.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales;
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTF2_9MICO
dihydroxyacetone kinase
SCNpilot_BF_INOC_scaffold_160_13
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12217..14193
DNA (1977bp) protein (659aa)
ptsP_1; phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DF0F4
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EYT58366.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteriu
SCNpilot_BF_INOC_scaffold_160_14
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14244..15479
DNA (1236bp) protein (412aa)
Hypothetical membrane protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIM8_9ACTN
Hypothetical membrane protein {ECO:0000313|EMBL:EAR25003.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15530..16117
DNA (588bp) protein (196aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RXZ4_LEIAQ
phosphoribosylglycinamide formyltransferase
SCNpilot_BF_INOC_scaffold_160_16
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16114..17700
DNA (1587bp) protein (529aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
IMP cyclohydrolase n=1 Tax=Agromyces italicus RepID=UPI0003B6A61D
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C
SCNpilot_BF_INOC_scaffold_160_17
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18059..19507)
DNA (1449bp) protein (483aa)
Putative permease n=1 Tax=Microbacterium sp. TS-1 RepID=U2YRV6_9MICO
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92761.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
permease
SCNpilot_BF_INOC_scaffold_160_18
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19869..21683
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00035E9FC3
Contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03533.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
putative ABC transporter fused permease and ATP-binding protein
SCNpilot_BF_INOC_scaffold_160_19
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21680..23491
DNA (1812bp) protein (604aa)
ABC transporter, ATP-binding protein id=7720984 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ABC transporter {ECO:0000313|EMBL:KJC65181.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
pimB; ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_160_20
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23555..26353
DNA (2799bp) protein (933aa)
ATPase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628935
Protein kinase {ECO:0000313|EMBL:EWT01022.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
transcriptional regulator, winged helix family
SCNpilot_BF_INOC_scaffold_160_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26423..28504
DNA (2082bp) protein (694aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73595.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
SCNpilot_BF_INOC_scaffold_160_22
unknown

Not on your lists

comp(28634..29110)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_160_23
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29178..29507)
DNA (330bp) protein (110aa)
DNA-binding protein id=7720986 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
DNA-binding protein {ECO:0000313|EMBL:KGJ72610.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
DNA-binding protein
SCNpilot_BF_INOC_scaffold_160_24
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29521..29973)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clavibacter michiganensis RepID=A5CU34_CLAM3
acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CAQ00720.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. seped
SCNpilot_BF_INOC_scaffold_160_25
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30082..31299
DNA (1218bp) protein (406aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifso
isocitrate dehydrogenase n=1 Tax=Leifsonia sp. 109 RepID=UPI000370AA6F
isocitrate dehydrogenase
SCNpilot_BF_INOC_scaffold_160_26
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31374..32354
DNA (981bp) protein (327aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=1386082 species="Bacteria; A
Malate dehydrogenase n=1 Tax=Frankia sp. CN3 RepID=G6HE36_9ACTO
malate dehydrogenase
SCNpilot_BF_INOC_scaffold_160_27
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32414..32986)
DNA (573bp) protein (191aa)
Uncharacterized conserved protein id=7720990 bin=CNBR_ACT species=Sanguibacter keddieii genus=Sanguibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02845.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_160_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33045..33488)
DNA (444bp) protein (148aa)
Heat shock protein Hsp20 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3P0_9MICO
18 kDa antigen 2 {ECO:0000313|EMBL:CDK01616.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
molecular chaperone
SCNpilot_BF_INOC_scaffold_160_29
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33688..35202)
DNA (1515bp) protein (505aa)
oxidoreductase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5D874
Uncharacterized protein {ECO:0000313|EMBL:KJC63367.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
flavodoxin reductase (ferredoxin-NADPH reductase) family 1
SCNpilot_BF_INOC_scaffold_160_30
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35199..36059)
DNA (861bp) protein (287aa)
Thiamin biosynthesis lipoprotein ApbE n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W0T7_9MICO
Thiamin biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EPR76255.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
membrane-associated lipoprotein
Displaying items 1-30 of 505 in total

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