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SCNpilot_BF_INOC_scaffold_1937

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1937_1
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1111
DNA (1110bp) protein (370aa)
N-6 DNA methylase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KBK0_THASP
type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:BAO82232.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;"
SCNpilot_BF_INOC_scaffold_1937_2
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1108..2247
DNA (1140bp) protein (380aa)
Type I restriction modification enzyme, S subunit n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UE33_RHOBA
EcoKI restriction-modification system protein HsdS {ECO:0000313|EMBL:EXI90133.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus A
type I restriction modification enzyme, S subunit
SCNpilot_BF_INOC_scaffold_1937_3

Not on your lists

2248..3105
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=mine drainage metagenome RepID=T1AWG3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD60693.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1937_4
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3522..4391
DNA (870bp) protein (290aa)
fic/DOC family protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037E4AEC
filamentation induced by cAMP protein fic
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_BF_INOC_scaffold_1937_5
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4417..5871
DNA (1455bp) protein (485aa)
restriction endonuclease subunit R n=1 Tax=Herbaspirillum seropedicae RepID=UPI00032583FC
Restriction endonuclease subunit R {ECO:0000313|EMBL:KHK57288.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia
type I site-specific restriction-modification system
SCNpilot_BF_INOC_scaffold_1937_6
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5862..7778
DNA (1917bp) protein (639aa)
Type III restriction protein res subunit n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KBJ4_THASP
Restriction endonuclease subunit R {ECO:0000313|EMBL:KHK57288.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia
type III restriction protein res subunit
SCNpilot_BF_INOC_scaffold_1937_7
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8050..9246
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BZ73_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ21840.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
SCNpilot_BF_INOC_scaffold_1937_8
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

9224..9622
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3APY7_CHLCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB28938.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
SCNpilot_BF_INOC_scaffold_1937_9
unknown

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comp(10215..10436)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1937_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10506..10733
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:EZH79202.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
SCNpilot_BF_INOC_scaffold_1937_11
unknown

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10849..11859
DNA (1011bp) protein (337aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1937_12
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12447..13766
DNA (1320bp) protein (440aa)
Phage integrase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8L3_9GAMM
Phage integrase {ECO:0000313|EMBL:EED40798.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp.
phage-related integrase rbh
SCNpilot_BF_INOC_scaffold_1937_13
unknown

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comp(14193..14516)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1937_14
unknown

Not on your lists

comp(14528..15277)
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1937_15
unknown

Not on your lists

comp(15277..15576)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1937_16
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15576..16934)
DNA (1359bp) protein (453aa)
PF09327 domain protein n=1 Tax=Klebsiella pneumoniae UHKPC45 RepID=S2FGI9_KLEPN
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44408.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
Phage-related protein, tail component
SCNpilot_BF_INOC_scaffold_1937_17
unknown

Not on your lists

comp(16931..17242)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1937_18
unknown

Not on your lists

comp(17256..17657)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1937_19
unknown

Not on your lists

comp(17657..17869)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 19 items

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