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SCNpilot_BF_INOC_scaffold_1990

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1990_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..108
DNA (108bp) protein (36aa)
addiction module killer protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000317433C
Addiction module killer protein {ECO:0000313|EMBL:EJL04719.1}; TaxID=1038922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
HigB toxin protein
SCNpilot_BF_INOC_scaffold_1990_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108..401
DNA (294bp) protein (98aa)
Cro/Ci family transcriptional regulator n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JIM3_PSEST
XRE family transcriptional regulator {ECO:0000313|EMBL:AKC87299.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source=
Cro/Ci family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1990_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

798..1184
DNA (387bp) protein (129aa)
Putative uncharacterized protein id=3247135 bin=GWC2_Deltaproteobacteria_66_88 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1520..2320
DNA (801bp) protein (267aa)
Putative Membrane protein-like n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0U094_9BRAD
Putative Membrane protein-like {ECO:0000313|EMBL:CCE12132.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizob
membrane protein
SCNpilot_BF_INOC_scaffold_1990_5
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2444..3001
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0ADE3_NITEC
Uncharacterized protein {ECO:0000313|EMBL:GAN34828.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

3165..3563
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJK4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69589.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
SCNpilot_BF_INOC_scaffold_1990_7
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3889..4104
DNA (216bp) protein (72aa)
Sortase-like acyltransferase n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EQA2_9CYAN
Sortase-like acyltransferase {ECO:0000313|EMBL:EKU99259.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_8
Acinetobacter sp. CIP A162, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4248..4499
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Acinetobacter RepID=N8Q8R4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENU17609.1}; TaxID=1144674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_9
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4564..5310
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QWT0_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62980.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Iso
SCNpilot_BF_INOC_scaffold_1990_10
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists

5379..5699
DNA (321bp) protein (107aa)
Small multidrug resistance protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W6M3_DESIS
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ADU65023.1}; TaxID=653733 species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indi
SCNpilot_BF_INOC_scaffold_1990_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5945..6520
DNA (576bp) protein (192aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS3_9GAMM
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AGG87276.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter deni
SCNpilot_BF_INOC_scaffold_1990_12
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6628..6972
DNA (345bp) protein (115aa)
cupin n=1 Tax=Thiobacillus denitrificans RepID=UPI000363965A
Cupin domain protein {ECO:0000313|EMBL:GAM10196.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_13
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7103..8437
DNA (1335bp) protein (445aa)
ferric reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AD2D6
ferric reductase
Predicted ferric reductase {ECO:0000313|EMBL:BAE52139.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetos
SCNpilot_BF_INOC_scaffold_1990_14
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8543..9154
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZA4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM80988.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_15
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9151..9543
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S498_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGD58815.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source=
putative exported protein
SCNpilot_BF_INOC_scaffold_1990_16
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(9726..10901)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003790A8D
GDSL-like lipase/acylhydrolase domain protein
Tax=CG_Pacebac_02
SCNpilot_BF_INOC_scaffold_1990_17
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10951..11103)
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E776_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV28043.1}; Flags: Precursor;; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_18
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

comp(11103..11510)
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Arthrospira RepID=K1WSI3_ARTPT
hypothetical protein Tax=CG_Cyano_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_19
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11513..13357)
DNA (1845bp) protein (615aa)
carbamoyltransferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RBG_16_Gamma2_60_9_curated
Carbamoyltransferase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E774_9GAMM
carbamoyltransferase
SCNpilot_BF_INOC_scaffold_1990_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13798..14457)
DNA (660bp) protein (220aa)
transcriptional regulator NarL; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL id=12493660 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transcriptional regulator NarL
Two Component Transcriptional Regulator, LuxR family {ECO:0000313|EMBL:AAZ97352.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacil
SCNpilot_BF_INOC_scaffold_1990_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14454..16382)
DNA (1929bp) protein (643aa)
periplasmic sensor signal transduction histidine kinase; K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] id=12493661 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
periplasmic sensor signal transduction histidine kinase; K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_
periplasmic sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1990_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16730..18700
DNA (1971bp) protein (657aa)
nitrous-oxide reductase (EC:1.7.99.6); K00376 nitrous-oxide reductase [EC:1.7.2.4] id=12493662 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
nitrous-oxide reductase (EC:1.7.99.6)
Nitrous-oxide reductase {ECO:0000313|EMBL:AAZ97342.1}; EC=1.7.2.4 {ECO:0000313|EMBL:AAZ97342.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilac
SCNpilot_BF_INOC_scaffold_1990_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18856..21537
DNA (2682bp) protein (894aa)
transmembrane regulatory NosR transcription regulator protein id=12493663 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane regulatory NosR transcription regulator protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transmembrane regulatory nosR transcription regulator protein
SCNpilot_BF_INOC_scaffold_1990_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21525..22805
DNA (1281bp) protein (427aa)
nitrous oxidase accessory protein; K07218 nitrous oxidase accessory protein id=12493664 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
nitrous oxidase accessory protein; K07218 nitrous oxidase accessory protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nitrous oxidase accessory protein
SCNpilot_BF_INOC_scaffold_1990_25
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22777..23718
DNA (942bp) protein (314aa)
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein id=12493665 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter {ECO:0000313|EMBL:ENO89107.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM
ABC transporter
SCNpilot_BF_INOC_scaffold_1990_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23728..24543
DNA (816bp) protein (272aa)
ABC transporter transmembrane protein; K01992 ABC-2 type transport system permease protein id=12493666 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter transmembrane protein; K01992 ABC-2 type transport system permease protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter transmembrane protein
SCNpilot_BF_INOC_scaffold_1990_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24540..25061
DNA (522bp) protein (174aa)
putative nitrous oxide reduction lipoprotein id=12493667 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative nitrous oxide reduction lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nitrous oxide reduction lipoprotein
SCNpilot_BF_INOC_scaffold_1990_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25071..25343
DNA (273bp) protein (91aa)
hypothetical protein id=12493668 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25340..25705
DNA (366bp) protein (122aa)
hypothetical protein id=12493669 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1990_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25705..26289
DNA (585bp) protein (195aa)
hypothetical protein id=12493670 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
Displaying 30 items

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