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SCNpilot_BF_INOC_scaffold_160_49

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 55164..56000

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, DeoR-family n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BAX4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 273.0
  • Bit_score: 247
  • Evalue 1.70e-62
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:AJW79905.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis s similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 274.0
  • Bit_score: 250
  • Evalue 2.10e-63
transcriptional regulator, DeoR-family similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 273.0
  • Bit_score: 247
  • Evalue 4.70e-63

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 837
GTGCCGGACGCCGCCCTCCCCGCCGAGCTGCGGCGCGCCCGCATCGCGGAGCGCGTGCGCGAAGACGGCATCCTGCGGGTCGCCGACGCCGCCGCGGAGTTCGGCGTGAGCGAGGTCACCATCCGCTCCGACCTCGGACAGCTCGAGGCGGCGGGGCTCGTGCGGCGCGTGCACGGCTCGGCGCTCCCCGTGCCGGGCGGCCCGCGAGAGGAGCCCGTCGAGCGGGTCTCGGCGCGGGACGCCGCGGCCAAGCGCGCCATCGGCCGCCGCGCCGCCGCGCTCGTCGACAGCGGCACGAGCGTGCTGCTCGACGTCGGCTCCACGACCCTCGCCGTCGCACACGCCCTCGCGGACCGCGTCGACCGGGGCGACCTCGACGAGCTCGTCGTCGTCACCAACGGCCTCTCGATCGCGCTCGCCCTCGAGCAGGCGGTGCCGCGCATCACCGTCGTGCTGAGCGGCGGCACCCTGCGACCGCTCCAGCACTCGCTCGTCGACCCCGGCGCCTCCGAGTCGATCGCCGGGCTGCACGTCGACCTCGCGATCCTCGGCTGCAACGGCGTCGACCGCGAGGGGCGCATCACCAACCTCAACCTCGCCGAGGCGGAGGTCAAACGCGCGATGCTCGCCGCATCCGCCGCCCGCCTCGTGGTGGCGGAGTCGGCCAAGCTGGGTGCGCGGCACCTCGGCACGATCGGCGTCGCCGACGCCGCGACGACCCTCGTGACCGCGGGCCCGTGGCCGGATGCCGCCGCCGAGACCGCCGCATCCCTCGCCGCGCTCGGCGCGCGCGTCATCCGCGCCGACGGTGGTCTCGAGGCCGGCGACCATCGCTAG
PROTEIN sequence
Length: 279
VPDAALPAELRRARIAERVREDGILRVADAAAEFGVSEVTIRSDLGQLEAAGLVRRVHGSALPVPGGPREEPVERVSARDAAAKRAIGRRAAALVDSGTSVLLDVGSTTLAVAHALADRVDRGDLDELVVVTNGLSIALALEQAVPRITVVLSGGTLRPLQHSLVDPGASESIAGLHVDLAILGCNGVDREGRITNLNLAEAEVKRAMLAASAARLVVAESAKLGARHLGTIGVADAATTLVTAGPWPDAAAETAASLAALGARVIRADGGLEAGDHR*