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SCNpilot_BF_INOC_scaffold_160_122

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 123291..123866

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00035CB9B0 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 126.0
  • Bit_score: 229
  • Evalue 3.20e-57
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 126.0
  • Bit_score: 227
  • Evalue 3.40e-57
Uncharacterized protein {ECO:0000313|EMBL:AGW40862.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 4630 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 126.0
  • Bit_score: 227
  • Evalue 1.70e-56

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Taxonomy

Leifsonia xyli → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGCCGCCCGACATGGAGGCTCCGGATGCCGCCGCGATCATCGTCGCCACGATCGCGATGATCGAGACCCCCATGACCGCGGCGATCATGGCGGCGAGCACGCGTTCGATACGATTGAGCGGGACGGGGGCGTTCTCGGGCACGAGACAACACTATGCCCCGCGCCTGCACCAGGATCAGCGAGAGAGGCTCGGCATGCCCACCGGCAAGGTGAAGTTCTACGACGAGGAGAAGGGCTTCGGCTTCGTCACCTCCGACGACGGCCAGGAGGTCTTCCTACACGCCTCCGCGCTGCCCGCCGGAGCGGTCGTGCGCGCCGGCACCCGGCTCGAGTTCGGCATCGCCGACGGCCGCAAGGGCGCGCAGGCGCTCTCGGTGCGCGTGCTCGACGCGCCGCCCAGCCTCAGCAAGCTCAACCGCCGCTCGGCGGACGACATGGCGATCGTCGTCGAGGACCTCGTGAAGCTCCTCGACGGCATCGGGGCGGGCCTCCGTCGCGGCCGCTACCCCGACCGCGCGCACGGCGCCAAGATCGCCGCGGTGCTGCGCAAGGTCGCCGACGACCTGGACGCGTAG
PROTEIN sequence
Length: 192
MPPDMEAPDAAAIIVATIAMIETPMTAAIMAASTRSIRLSGTGAFSGTRQHYAPRLHQDQRERLGMPTGKVKFYDEEKGFGFVTSDDGQEVFLHASALPAGAVVRAGTRLEFGIADGRKGAQALSVRVLDAPPSLSKLNRRSADDMAIVVEDLVKLLDGIGAGLRRGRYPDRAHGAKIAAVLRKVADDLDA*