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SCNpilot_BF_INOC_scaffold_160_314

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 309867..310418

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002889348 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 184.0
  • Bit_score: 150
  • Evalue 1.40e-33
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 181.0
  • Bit_score: 148
  • Evalue 2.00e-33
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CAN01121.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter mich similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 181.0
  • Bit_score: 148
  • Evalue 9.70e-33

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GTGACCACAGCATCCGAGCTCCGTGACGCCGCCCTCCGGGAGTTCGCCTCCGCGGGCTACCTCGGCACCTCGATCCAGGCGATCGCCGACCGCGCGGGGGTCTCCAAGGCGAGCGTGCTCTACCACTACACCTCGAAGGAAGCGCTGCTCGACGCAGCCCTGAGTCCGGCGATCGAGCAGATCGGGGCGATCCTCCCGCGCACCGTGCAGCTCTCGGGCACCGACGAGGAGCGTCGTGACTTCCTCGTCCGGTTCGTCGACCTGCTGCTCGAGCACCGCCTTGCCGCCCAGATCTTCATCACGCAGTCGGGCGCCCTCATCGACGTGCCCGTCGTCGCCCGAGCTCAGGTGCTCATCCGCGAGATCGCCGAGGCGCGACCGCAGCAGACGGTCGACGACCAGGTGCGGTTCGCCGTCGCCCTCGGCGGCGCCGCCTACCTCCTCGCGCAGGCCGGCAGCTACGGCGTCCAGGCCGCACCGGACGACACGCAGCTGCGCGACTCCCTCATCCGCATCCTCGGCGAGCTGCTCGCCTCCGTCACCCCCGCCTAG
PROTEIN sequence
Length: 184
VTTASELRDAALREFASAGYLGTSIQAIADRAGVSKASVLYHYTSKEALLDAALSPAIEQIGAILPRTVQLSGTDEERRDFLVRFVDLLLEHRLAAQIFITQSGALIDVPVVARAQVLIREIAEARPQQTVDDQVRFAVALGGAAYLLAQAGSYGVQAAPDDTQLRDSLIRILGELLASVTPA*