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SCNpilot_BF_INOC_scaffold_160_351

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 349861..350880

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, LacI-family n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CPA9_CLAM3 similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 337.0
  • Bit_score: 293
  • Evalue 2.50e-76
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 337.0
  • Bit_score: 293
  • Evalue 7.00e-77
Tax=BJP_IG2157_Actinomycetales_63_19 similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 334.0
  • Bit_score: 312
  • Evalue 7.20e-82

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Taxonomy

BJP_IG2157_Actinomycetales_63_19 → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGCGCAGGCGAGACGCAACCCGAGCATGCACGACGTCGCCGCCCTGGCCGGCGTCAGCCACATCACCGTCTCGCGCGTACTCAACGACTACTCGTCGATCCGGCCCGAGACCCGCGAGCGCGTGCTCGCCGCCATCGCCGAGCTCGGCTACCGGCGCAACCTCGCCGCGCGGGCGCTCGTCACGAGCCGCACCCGCGCCATCGGGGTGCTCTCGCCGGAGGTCGCGCAGCACGGTCCGGCCTCGAGCGTGCTCGCGGTCGAGTCGGCCGCGCGCGAGCACGGCTACCATCCGCTCGTCACGGCCGCCGCGGTCGAGCACGACGCGACCGTCGCCGCGCTCGGCTTCCTGCTCGACCAGGCCGTCGAGGCGCTCGTCGTGATCGCACCCCACGAGACGGTGCTCGCCGCGATCCGCGACCTCGACATCCGCGTCCCCCTCGTGACGCTGCAGGCCCCCGACCGGCCGGGCGGGGTCGGTGTCGACCAGGCGGCGGGGGTGCGCCTCGCCACGGAGCATCTGCTCGGGCTCGGTCACACCCGCATCCAGCACCTCGCCGGGCCCGCGGGCTCGCTCGAGGCGGCCGCGCGACTGCTCGGCTACGCCGAGGCGATGGGGGAGCACGAGACGCCCGAGGTGCTGTTCGGCGACTGGGGGGCGGCCTCCGGCTATGCCGCGGCCTCCCTGCTGGAACCCGGGGTGACCGCGGTCGTCGCCGGGAACGACCAGATGGCGATCGGCCTCATCGCGGGGCTCGCGGATTCGGGGCGCCGGGTGCCGGGAGACATCTCGGTGGTCGGTTTCGACGACATCCCGGAGGCGCCCTACGTCCGCCCGGCGCTCACCACCGTGCACCAGGACTTCGAGCTCGTCGGCCGCCGGGCGGTCGAGGCGCTGCTCGCGCAGCTGGCGCCTGCCGCGGGGCCGGCGGCCGCGCCCGGCGTCCCGGTCGCGACGAACGTCATCGCGCCTCACCTCGTCGTGCGCGCCTCGACGAGCGCGCCGCCCCGCACGCGCTGA
PROTEIN sequence
Length: 340
MAQARRNPSMHDVAALAGVSHITVSRVLNDYSSIRPETRERVLAAIAELGYRRNLAARALVTSRTRAIGVLSPEVAQHGPASSVLAVESAAREHGYHPLVTAAAVEHDATVAALGFLLDQAVEALVVIAPHETVLAAIRDLDIRVPLVTLQAPDRPGGVGVDQAAGVRLATEHLLGLGHTRIQHLAGPAGSLEAAARLLGYAEAMGEHETPEVLFGDWGAASGYAAASLLEPGVTAVVAGNDQMAIGLIAGLADSGRRVPGDISVVGFDDIPEAPYVRPALTTVHQDFELVGRRAVEALLAQLAPAAGPAAAPGVPVATNVIAPHLVVRASTSAPPRTR*