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SCNpilot_BF_INOC_scaffold_160_356

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 356011..356574

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AE9B similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 190.0
  • Bit_score: 197
  • Evalue 1.00e-47
Transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 190.0
  • Bit_score: 195
  • Evalue 1.90e-47
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH29537.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix esp similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 190.0
  • Bit_score: 195
  • Evalue 9.20e-47

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Taxonomy

Saccharothrix espanaensis → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGACCGACCCCAGACCGCTGCGCGCCGACGCCCGCCGCAATCGCGACGCGATCATCGCGGCGGCCCGTGAGGCGTTCGACCGCGGCGACGCCGAGCTGAGGTTCGACGACTTCGCGGCGCTCGCCGGCGTCGGCGTCGGCACCCTCTACCGCCATTTCCCGACCCGTGAGGCGCTCGCCGAGGCCGTCTACCACGACGAGGTCGTCGCGCTCGGCGAACTCGCTCGCCGGTTGCTCGCCGAGCAGCCCCCGCGTGAGGCGCTCGCGGCGTTCCTCCACGGCTTCGTCGCCTGGCTCGCCGAGCGGGAGGGTCTCGCGCTGGCGCTCACGGGGTTCATCCGCGGCAGGCCCGAGGTGCAGGTGGCGGGCGGGCGGGCGCTCGCGGAGGCCGTAGTCGAGCTCGTGGATGCCGCCCGCGCCGAGGGCGCGACGGGGCTCACCGTCGGCGCCGTGATGATGGCGCTCCACGGCATCGGCTCGACCTACGGCGCACCGGGCTGGCGCGACGACGCCGACGCGCTGGTGGGGCTCGTCGTCGCCGGGAGCCTCAGCGGGAGGAGTTGA
PROTEIN sequence
Length: 188
MTDPRPLRADARRNRDAIIAAAREAFDRGDAELRFDDFAALAGVGVGTLYRHFPTREALAEAVYHDEVVALGELARRLLAEQPPREALAAFLHGFVAWLAEREGLALALTGFIRGRPEVQVAGGRALAEAVVELVDAARAEGATGLTVGAVMMALHGIGSTYGAPGWRDDADALVGLVVAGSLSGRS*