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SCNpilot_BF_INOC_scaffold_2454_11

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 14055..14879

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=7 Tax=Bordetella RepID=K0MDK9_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 274.0
  • Bit_score: 300
  • Evalue 1.60e-78
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 274.0
  • Bit_score: 300
  • Evalue 4.60e-79
Putative type II secretion system protein {ECO:0000313|EMBL:CCJ48076.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 274.0
  • Bit_score: 300
  • Evalue 2.30e-78

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Taxonomy

Bordetella parapertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCAAATGTCTTCCCAGCGCCGCCAGGGCGGCTTCACCCTCGTCGAGATGGCCGTGGTGCTGGTCATCATCGGCGTGATCATCGGCGCGGTCATGATCGGCCGCGACGTGCAGCGCAACGCCGAGTACACCCGCATCAAGCAGAAGTTCGTCGACCAGTGGGTGGTCACCTACAACAGCTACCACCAGCGCTACGGCGCGCCGATCGGCGACAACCAGTCCGCGCCGCAGCTGATGGTCAATGGCACCCACTTCACCGGCTTCTCCGGCGGCGACATGAGCCAGAACGCGACCGAGCCGGCGCTGATCTGCTCCGGCACCGACGCACTGCCGACCAGCAACGGCCTGACCCGCACCCGCGAGGGCGACACCGGCTTTGACCTGCGCGACCTGGTGCGCAAGGCCGGCATCACCCTGCCGCCGGGCCGCGGCGAGGGCAAGGAAGACCGCTACGCCTACCTGGACACCAACGGCAACCCGCAGGAAATCCGCGTGTGCTTCGGCTGGAACCGGCCCGGCACGCTGTGGGGCTCGGGCAACGCGATGATCATCACCGGGCTGACCCCGGACCTGGCCCGTGCACTGGACCAGATGATCGACGGCAAGCCCGACGCCAGCAACGGCGCCTTCCGCCAGGTCGGCATCCAGTCGCGCACCGCCACCGCGTCCGGCGGCGCGACCACGGCCAACGCCATCGGCGCCGAATGGGGCGGCAACAACACCGGTTCGATGTCCTCGGCCGTCACCGACGGCAAGACGTTCGGCACCGGCACCGACGACGACCAGGTCATGACCGTCGTCGCCAGCTACAAGATGAACCAGTAA
PROTEIN sequence
Length: 275
MQMSSQRRQGGFTLVEMAVVLVIIGVIIGAVMIGRDVQRNAEYTRIKQKFVDQWVVTYNSYHQRYGAPIGDNQSAPQLMVNGTHFTGFSGGDMSQNATEPALICSGTDALPTSNGLTRTREGDTGFDLRDLVRKAGITLPPGRGEGKEDRYAYLDTNGNPQEIRVCFGWNRPGTLWGSGNAMIITGLTPDLARALDQMIDGKPDASNGAFRQVGIQSRTATASGGATTANAIGAEWGGNNTGSMSSAVTDGKTFGTGTDDDQVMTVVASYKMNQ*