ggKbase home page

SCNpilot_BF_INOC_scaffold_2454

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2454_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..150
DNA (150bp) protein (50aa)
inorganic diphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=216778 species="Bac
inorganic pyrophosphatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000305520F
SCNpilot_BF_INOC_scaffold_2454_2
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220..1425
DNA (1206bp) protein (402aa)
chemotaxis protein CheY n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFBAEF
Chemotaxis protein CheY {ECO:0000313|EMBL:KCX00961.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboric
two-component system response regulator
SCNpilot_BF_INOC_scaffold_2454_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1680..4454)
DNA (2775bp) protein (925aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSI0_STEMA
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:KDE92087.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
SCNpilot_BF_INOC_scaffold_2454_4
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4501..5406)
DNA (906bp) protein (302aa)
AraC family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F20B8A
Transcriptional regulator {ECO:0000313|EMBL:EED38811.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotropho
hth transcriptional regulator
SCNpilot_BF_INOC_scaffold_2454_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5519..7846)
DNA (2328bp) protein (776aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFC7E6
TolB protein {ECO:0000313|EMBL:EZP44718.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RI
cadC; transcriptional activator cadC
SCNpilot_BF_INOC_scaffold_2454_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8345..10222)
DNA (1878bp) protein (626aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short
Phosphomethylpyrimidine synthase n=2 Tax=Stenotrophomonas maltophilia RepID=J7SYG9_STEMA
thiC; thiamine biosynthesis protein ThiC
SCNpilot_BF_INOC_scaffold_2454_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10672..11310
DNA (639bp) protein (213aa)
glycine/betaine ABC transporter permease n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036CD88E
opuD2; glycine betaine transporter 2
Putative glycine betaine transporter 2 {ECO:0000313|EMBL:CAQ47313.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotro
SCNpilot_BF_INOC_scaffold_2454_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11256..12176
DNA (921bp) protein (307aa)
Choline/carnitine/betaine transporter n=2 Tax=Stenotrophomonas maltophilia RepID=B4SI61_STRM5
Stenotrophomonas maltophilia strain ZBG7B contig_84, whole genome shotgun sequence {ECO:0000313|EMBL:KIP81050.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
choline/carnitine/betaine transporter
SCNpilot_BF_INOC_scaffold_2454_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12210..13154)
DNA (945bp) protein (315aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACF53026.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACF53026.1};; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonada
Gamma-glutamyltransferase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SI62_STRM5
SCNpilot_BF_INOC_scaffold_2454_10
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13118..13849)
DNA (732bp) protein (244aa)
Gamma-glutamyltranspeptidase n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BPK4_XANC5
gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03
Gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 {ECO:0000313|EMBL:AJZ41261.1}; TaxID=611301 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
SCNpilot_BF_INOC_scaffold_2454_11
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14055..14879
DNA (825bp) protein (275aa)
Putative type II secretion system protein n=7 Tax=Bordetella RepID=K0MDK9_BORPB
type II secretion system protein
Putative type II secretion system protein {ECO:0000313|EMBL:CCJ48076.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
SCNpilot_BF_INOC_scaffold_2454_12
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14884..15423
DNA (540bp) protein (180aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TW70_BORBO
Putative exported protein {ECO:0000313|EMBL:CCN21562.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchis
hypothetical protein
SCNpilot_BF_INOC_scaffold_2454_13
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15420..17264
DNA (1845bp) protein (615aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K0MSQ2_BORBM
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCV60730.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
hypothetical protein
SCNpilot_BF_INOC_scaffold_2454_14
unknown

Not on your lists

17261..17863
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2454_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17865..18653
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003678A67
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2454_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18708..20462
DNA (1755bp) protein (585aa)
Putative type II secretion system protein n=3 Tax=Bordetella bronchiseptica RepID=K0MRV5_BORBM
type II secretion system protein
Pilus (MSHA type) biogenesis protein MshL {ECO:0000313|EMBL:KDD62295.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
SCNpilot_BF_INOC_scaffold_2454_17
unknown

Not on your lists

20459..20719
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2454_18
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20719..21336
DNA (618bp) protein (206aa)
Putative membrane protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QLP9_BORBO
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:KDD62287.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella b
SCNpilot_BF_INOC_scaffold_2454_19
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21333..22775
DNA (1443bp) protein (481aa)
Putative type II secretion system protein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MP29_BORBM
General secretion pathway protein A family protein {ECO:0000313|EMBL:KDD62290.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" so
type II secretion system protein
SCNpilot_BF_INOC_scaffold_2454_20
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22762..24468
DNA (1707bp) protein (569aa)
Putative type II secretion system protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MEB4_BORPB
Type II/IV secretion system protein {ECO:0000313|EMBL:KCV63161.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetell
type II secretion system protein
SCNpilot_BF_INOC_scaffold_2454_21
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24465..25721
DNA (1257bp) protein (419aa)
Putative type II secretion system protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QFA6_BORBO
type II secretion system protein
Type II secretion system protein F {ECO:0000313|EMBL:KCV63162.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
SCNpilot_BF_INOC_scaffold_2454_22
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26587..27768
DNA (1182bp) protein (394aa)
hypothetical protein
hypothetical protein id=12550102 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:KDD62293.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordet
Displaying 22 items

View Taxonomy