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SCNpilot_BF_INOC_scaffold_2454_20

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 22762..24468

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MEB4_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 566.0
  • Bit_score: 760
  • Evalue 1.20e-216
Type II/IV secretion system protein {ECO:0000313|EMBL:KCV63161.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetell similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 567.0
  • Bit_score: 768
  • Evalue 8.00e-219
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 566.0
  • Bit_score: 760
  • Evalue 3.40e-217

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGGCAACGGTTGATCCCACCCCCGCCCGCCCCGCGCCCCCGCCCGCCGTGCAGCGCGACGGCACGCGCCTGGGCGAACGCCTGCTCGAACGCGGCCTGATCGACGCCACCCAGCTGCAGTACGCGCTGCAGAAGAACGAGGTCGAGAAGCAGCGCCTGGGGCGGATCCTGATCCGCCACGGCCTGGCCAACGAATCGGACATCGTGCGCGTGCTGGCCGAGATGAACGGCATCGAGGACGTGCAGGTGGACACCCTGGCGCACGCCGACCCGCAGGTGCTGGCGATGTTCAACCGCGAGCTGTGCCAGCTGCGCCAGTTCCTGCCGCTGCGGCGTGCCGGCGATGCGCTGGAAGTGCTGCTCGGCGACGCCGACACCCAGGCCGTGGGGCAGCTGGTACTGCAGCGCTGCGGCCTGCGCTGCCGCTTCCTGCAGGGCGAATACGGCAAGGTCGCGCGGCTGATCCGCCACACCTACTACTTCGCGCAGAACCCGGTCGAGAGCCTGCTCGAACGCGAGATCAAGCGGCTGTCCACCGACAACGACCATGCCTACAGCCCGGAAAAGCTGCTGGACTACCTGCTGCACTACGCGGTGCGCGAACGCACCACCGACATCCACCTGGCGCCGTCCGACGACAGCCTGCACGTGCTGTTCCGCGTCGACGGCGTGCTGCGGCCGATGTTCGCCATGCCGCTCACCCTCAACCGCCTGCTCGGCTACATCAAGCTGACCGCGGAAATGGACATCTCCGAACAGCGCCGCCCGCAGGACGGCAGCTTCCGCGCCACGGTGCTGGATTCGGCGGTGACCGTGCGCGTGTCCACCCTGATCACCGATGCCGGCGAGCGCACCGTCATGCGCCTGCTGCCCGAGCACAGCGACCTGGCCGGGCTGGAGGAGCTGGGCTTCTTCGCCGAGGACGTGGCGGTGCTCGAGCGCCTGTTCGCGCGCCCGGCCGGGCTGGTGCTGATCACCGGCCCCACCGGTTCGGGCAAGAGCTCCTCGCTGCATGCCGCGCTCAGGATGCAGTCGCTGATCGAGCGCAACGTGCTCACCGTCGAGGACCCGATCGAGTACCGCGTGCCCGGCGCCGGCCAGACCGAGGTGAACCGTCGCGCCGGTTACGAGTTCAGCTCGGCGCTGCGGCATTTCCTGCGCCACGACCCGGACGTGATCCTGCTGGGCGAAATGCGCGACGCCGAAACCGCGCAGGCCGCGCTGGAAGCGGCGGCCACCGGCCACCTGGTGCTCTCGACCCTGCACGTGACCACCGTGTTCGGCGTGGTCCCGCGCCTGCGCCCGCTGGGCCTGGAGGCGCAGGTCATCGCCGACAACCTGCTGGCCGTGGTCAACCAGCGCCTGGTCCGCCAGAACTGCCCGTTCTGCACCCACGACGTGCCGTTCAGCGAGCGCGAACTGGAATGGCTGGACCTGCCCCCGGGCAGCTGCGGCAAGCGCGGCGCCGGTTGCGAGCGCTGTCGCGGCAGCGGCTTCCATGGCCGCCTGCCGGTGTACGACATCATGGTGGTGGACGAGGCGCTGGCCAACGGCATCGCCGACGACGTCAGCCGCGAGACGCTGCGCAACCTGGCCATGAACGCCGGCTTCCGCAGCATCGAGGACGTCGCCCGGGCGCGCGTCCTCGCCGGCCAGACCACCAGCGAGGAAGTGATGCGCGTGGCCGGCGTGGGGCCGGCGCCATGA
PROTEIN sequence
Length: 569
MATVDPTPARPAPPPAVQRDGTRLGERLLERGLIDATQLQYALQKNEVEKQRLGRILIRHGLANESDIVRVLAEMNGIEDVQVDTLAHADPQVLAMFNRELCQLRQFLPLRRAGDALEVLLGDADTQAVGQLVLQRCGLRCRFLQGEYGKVARLIRHTYYFAQNPVESLLEREIKRLSTDNDHAYSPEKLLDYLLHYAVRERTTDIHLAPSDDSLHVLFRVDGVLRPMFAMPLTLNRLLGYIKLTAEMDISEQRRPQDGSFRATVLDSAVTVRVSTLITDAGERTVMRLLPEHSDLAGLEELGFFAEDVAVLERLFARPAGLVLITGPTGSGKSSSLHAALRMQSLIERNVLTVEDPIEYRVPGAGQTEVNRRAGYEFSSALRHFLRHDPDVILLGEMRDAETAQAALEAAATGHLVLSTLHVTTVFGVVPRLRPLGLEAQVIADNLLAVVNQRLVRQNCPFCTHDVPFSERELEWLDLPPGSCGKRGAGCERCRGSGFHGRLPVYDIMVVDEALANGIADDVSRETLRNLAMNAGFRSIEDVARARVLAGQTTSEEVMRVAGVGPAP*