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SCNpilot_BF_INOC_scaffold_3217_14

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: comp(12865..13407)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EUU2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 176.0
  • Bit_score: 83
  • Evalue 2.10e-13
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CCX92357.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.0
  • Coverage: 176.0
  • Bit_score: 83
  • Evalue 2.90e-13
rpoE; RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 176.0
  • Bit_score: 75
  • Evalue 1.60e-11

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Taxonomy

Firmicutes bacterium CAG:110 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
TTGCTTCTGTTAGAAAATGATGAATTAATAGTTAAATATGCAAAAGGTGAAAAGCAATCAATTTCAATCTTATTTGACAAATATTATTCTTTGTGTTTGTTTTGTTCCATGAATATTCTAGGTTGCAAAGAAGATGCAGAAGATGCAGTTAGTTCAGCTTTTGTAGATTTATGGGAAACAAGACAAAAATATAATAAAGAAATATGTAGCTTAAAAACATGGCTTTTGATGTTTGTCAGAAGAAGATCCATTGATATTCTTAGAAAACGACATCCCTGTTTTTCTGTTGATGATGATCGTTTCATCGAAATACCTATACATAATACAAATCGTTTAGAATATCGGGATTTATTGTTACAAATCATGAACTCTCTTTCTTCTTATGAAAAAGACTTGTTTTATAGAAGGTTTTTTTATTTACAAAGTTACGAAGAAATTGCAAGGCATACAGAAAAAAGTGTTGATTCCATTAAGAGTTCTCTATACCGAATTCGAAAATACATTAAAAAAAATTTTTATCGAGAGGGAAAGACATATGAATAA
PROTEIN sequence
Length: 181
LLLLENDELIVKYAKGEKQSISILFDKYYSLCLFCSMNILGCKEDAEDAVSSAFVDLWETRQKYNKEICSLKTWLLMFVRRRSIDILRKRHPCFSVDDDRFIEIPIHNTNRLEYRDLLLQIMNSLSSYEKDLFYRRFFYLQSYEEIARHTEKSVDSIKSSLYRIRKYIKKNFYREGKTYE*