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SCNpilot_BF_INOC_scaffold_89_29

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 18036..19025

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 329.0
  • Bit_score: 594
  • Evalue 7.00e-167
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 327.0
  • Bit_score: 592
  • Evalue 7.00e-167
DNA-directed RNA polymerase subunit alpha n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B76A42 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 329.0
  • Bit_score: 602
  • Evalue 3.10e-169

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Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
GTGCTCATCGCACAGCGTCCCACCCTCTCCGAAGAGGTCATCTCGGAGTTCCGCTCCGCGTTCGTCATCGAGCCCCTCGAGCCCGGCTTCGGCTACACGCTCGGCAACTCGCTGCGCCGCACCCTGCTGTCGTCCATCCCGGGCGCGGCGGTCACGAGCATCCGCCTCGACGGCATCCAGCACGAGTTCGACACCATCCCCGGTGTCAAGGAGGACGTCGTCGAGATCGTCCTCAACATCAAGAACCTGGTCGTCTCGAGCGAGCACGACGAGCCCATCACCGCCTACCTGCGCAAGACCGGCGCGGGCCAGGTGACCGCCGCCGACATCTCGGCGCCGGCGGGGGTCGAGATCCACAACCCGGACCTCGTCATCGCGACGCTCAACGACAAGGCGAAGTTCGACCTCGAGCTCACCATCGAGCGCGGCCGCGGCTACGTCTCGGCCACCCAGAACCGCAGCGAGTTCAGCGAGGCCGGCCAGATCCCGGTCGACTCGATCTACTCGCCCGTGCTCAAGGTCACCTACCGCGTCGAGGCCACCCGTGCCGGCGAGCGCACCGACTTCGACCGCCTCGTGGTCGACGTCGAGACGAAGCCGGCGATCACGCCGCGCGACGCCATCGCATCCGCCGGTCGCACCCTCGTCGAGCTCTTCGGTCTCGCCCGCGAGCTCAACACCGCGGCCGAGGGCATCGAGATCGGGCCGGCCCCGGTCGACGCCGTGCTCTCGAGCGAGCTGTCGATGCCCATCGAGGACCTCGACCTCTCGGTGCGCTCGTACAACTGCCTCAAGCGCGAGGGCATCAACACCGTCAGCGAGCTCGTCGCCCTCTCGGAGACGCAGCTCATGAACATCCGCAACTTCGGTCAGAAGTCCGTGGACGAGGTGAAGGACAAGCTCGTCGAGCTCGGCCTCTCGCTCAAGGACAGCGTGCCCGGCTTCGACGGCGCGCACTTCTACGGCGGATACGACGACGAGACCGTCTGA
PROTEIN sequence
Length: 330
VLIAQRPTLSEEVISEFRSAFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRLDGIQHEFDTIPGVKEDVVEIVLNIKNLVVSSEHDEPITAYLRKTGAGQVTAADISAPAGVEIHNPDLVIATLNDKAKFDLELTIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEATRAGERTDFDRLVVDVETKPAITPRDAIASAGRTLVELFGLARELNTAAEGIEIGPAPVDAVLSSELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDKLVELGLSLKDSVPGFDGAHFYGGYDDETV*