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SCNpilot_BF_INOC_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_89_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..648
-----------------
DNA (648bp)
protein (216aa)
50S ribosomal protein L2 n=2 Tax=Microbacterium RepID=H8E521_9MICO
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 1
rplB; ribosomal protein L2
SCNpilot_BF_INOC_scaffold_89_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


661..942
-----------------
DNA (282bp)
protein (94aa)
30S ribosomal protein S19 n=2 Tax=Microbacterium RepID=H8E520_9MICO
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rpsS; ribosomal protein S19
SCNpilot_BF_INOC_scaffold_89_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


981..1364
-----------------
DNA (384bp)
protein (128aa)
50S ribosomal protein L22 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E519_9MICO
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rplV; 50S ribosomal protein L22
SCNpilot_BF_INOC_scaffold_89_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1364..2125
-----------------
DNA (762bp)
protein (254aa)
30S ribosomal protein S3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E518_9MICO
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans O
rpsC; 30S ribosomal protein S3
SCNpilot_BF_INOC_scaffold_89_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2125..2544
-----------------
DNA (420bp)
protein (140aa)
50S ribosomal protein L16 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E517_9MICO
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rplP; 50S ribosomal protein L16
SCNpilot_BF_INOC_scaffold_89_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2544..2858
-----------------
DNA (315bp)
protein (105aa)
Ribosomal protein L29 n=2 Tax=Microbacterium RepID=H8E516_9MICO
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon
rpmC; ribosomal protein L29
SCNpilot_BF_INOC_scaffold_89_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2858..3223
-----------------
DNA (366bp)
protein (122aa)
30S ribosomal protein S17 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E515_9MICO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rpsQ; 30S ribosomal protein S17
SCNpilot_BF_INOC_scaffold_89_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3227..3595
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L14 n=2 Tax=Microbacterium RepID=H8E514_9MICO
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rplN; 50S ribosomal protein L14
SCNpilot_BF_INOC_scaffold_89_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3601..3960
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L24 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E513_9MICO
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans
rplX; ribosomal protein L24
SCNpilot_BF_INOC_scaffold_89_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3963..4553
-----------------
DNA (591bp)
protein (197aa)
50S ribosomal protein L5 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABE6_9MICO
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rplE; 50S ribosomal protein L5
SCNpilot_BF_INOC_scaffold_89_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4641..5039
-----------------
DNA (399bp)
protein (133aa)
30S ribosomal protein S8 n=2 Tax=Microbacterium RepID=H8E511_9MICO
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 1
rpsH; 30S ribosomal protein S8
SCNpilot_BF_INOC_scaffold_89_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5046..5582
-----------------
DNA (537bp)
protein (179aa)
50S ribosomal protein L6 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E510_9MICO
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
rplF; 50S ribosomal protein L6
SCNpilot_BF_INOC_scaffold_89_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5585..5944
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L18 n=2 Tax=Microbacterium RepID=H8E509_9MICO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon
rplR; 50S ribosomal protein L18
SCNpilot_BF_INOC_scaffold_89_14
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5941..6621
-----------------
DNA (681bp)
protein (227aa)
30S ribosomal protein S5 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCS8_9MICO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
rpsE; 30S ribosomal protein S5
SCNpilot_BF_INOC_scaffold_89_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6621..6806
-----------------
DNA (186bp)
protein (62aa)
50S ribosomal protein L30 n=2 Tax=Microbacterium RepID=H8E507_9MICO
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rpmD; ribosomal protein L30/L7E
SCNpilot_BF_INOC_scaffold_89_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6806..7393
-----------------
DNA (588bp)
protein (196aa)
50S ribosomal protein L15 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E506_9MICO
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rplO; ribosomal protein L15
SCNpilot_BF_INOC_scaffold_89_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7503..8840
-----------------
DNA (1338bp)
protein (446aa)
Protein translocase subunit SecY n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADQ9_9MICO
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
secY; preprotein translocase subunit SecY
SCNpilot_BF_INOC_scaffold_89_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8837..9436
-----------------
DNA (600bp)
protein (200aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBC2_LEIAQ
adenylate kinase
SCNpilot_BF_INOC_scaffold_89_19
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9844..11742)
-----------------
DNA (1899bp)
protein (633aa)
transcriptional antiterminator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B4B2FB
Transcriptional antiterminator {ECO:0000313|EMBL:KGJ82385.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
BigG family transcription antiterminator
SCNpilot_BF_INOC_scaffold_89_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11984..12304
-----------------
DNA (321bp)
protein (107aa)
putative PTS system cellobiose-specific IIB component (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SWE0_LEIAQ
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:ERK69593.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aqu
SCNpilot_BF_INOC_scaffold_89_21
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12304..12576
-----------------
DNA (273bp)
protein (91aa)
phosphotransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B3A616
phosphotransferase
Strain 70137, complete genome {ECO:0000313|EMBL:AJM78316.1}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
SCNpilot_BF_INOC_scaffold_89_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12573..14258
-----------------
DNA (1686bp)
protein (562aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCC6_MICTS
ptsI; phosphoenolpyruvate-protein kinase
SCNpilot_BF_INOC_scaffold_89_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14289..15845
-----------------
DNA (1557bp)
protein (519aa)
Putative EIICBA-Mtl n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R503_LEIAQ
Putative EIICBA-Mtl {ECO:0000313|EMBL:ERK70340.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phosphotransferase system, mannitol-specific IIBC component
SCNpilot_BF_INOC_scaffold_89_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15880..16320
-----------------
DNA (441bp)
protein (147aa)
PTS mannitol transporter subunit IIA n=1 Tax=Leifsonia sp. 109 RepID=UPI000376D848
Putative mannitol-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:ERK70339.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source
PTS system, mannitol-specific enzyme II, A component
SCNpilot_BF_INOC_scaffold_89_25
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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16454..16675
-----------------
DNA (222bp)
protein (74aa)
translation initiation factor IF-1 n=1 Tax=Curtobacterium RepID=UPI00034BDFE5
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccu
translation initiation factor IF-1
SCNpilot_BF_INOC_scaffold_89_26
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16738..16854
-----------------
DNA (117bp)
protein (39aa)
50S ribosomal protein L36 n=3 Tax=Microbacterium RepID=H8E500_9MICO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
50S ribosomal protein L36
SCNpilot_BF_INOC_scaffold_89_27
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17061..17441
-----------------
DNA (381bp)
protein (127aa)
30S ribosomal protein S13 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B61F0D
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
SCNpilot_BF_INOC_scaffold_89_28
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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17441..17839
-----------------
DNA (399bp)
protein (133aa)
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=7719943 bin=CNBR_ACT species=unknown genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
30S ribosomal protein S11
SCNpilot_BF_INOC_scaffold_89_29
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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18036..19025
-----------------
DNA (990bp)
protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B76A42
SCNpilot_BF_INOC_scaffold_89_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19071..19643
-----------------
DNA (573bp)
protein (191aa)
50S ribosomal protein L17 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FC0E5
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
rplQ; ribosomal protein L17
Displaying items 1-30 of 139 in total

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