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SCNpilot_BF_INOC_scaffold_307

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_307_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..8262)
DNA (8262bp) protein (2754aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003713301
Uncharacterized protein {ECO:0000313|EMBL:AIF46698.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_307_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8519..9295
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D8A054
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AIF48487.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
SCNpilot_BF_INOC_scaffold_307_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9318..12116)
DNA (2799bp) protein (933aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000367712B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48486.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_307_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12117..12833)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BBB83
Putative signal protein with GGDEF domain {ECO:0000313|EMBL:EIL94925.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_307_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12909..14429)
DNA (1521bp) protein (507aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8X4_9GAMM
lysyl-tRNA synthetase (class II)
SCNpilot_BF_INOC_scaffold_307_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14624..14974)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIL0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99301.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_BF_INOC_scaffold_307_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15017..16138)
DNA (1122bp) protein (374aa)
Peptide chain release factor 2 n=1 Tax=Rhodanobacter denitrificans RepID=M4NDJ7_9GAMM
bacterial peptide chain release factor 2 (bRF-2)
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; Flags: Precursor;; TaxID=666685 species="Bacteria; Prote
SCNpilot_BF_INOC_scaffold_307_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16542..18224)
DNA (1683bp) protein (561aa)
asparagine synthase, glutamine-hydrolyzing (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIL2_9GAMM
Asparagine synthetase B {ECO:0000313|EMBL:EIL99303.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
SCNpilot_BF_INOC_scaffold_307_9
unknown

Not on your lists

comp(18376..18495)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_307_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18570..18944)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIL3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX13020.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_307_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19145..20944)
DNA (1800bp) protein (600aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWN3_9GAMM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EIL91624.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
ssDNA exonuclease RecJ
SCNpilot_BF_INOC_scaffold_307_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20896..21807)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8Y1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95922.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_307_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21820..23799)
DNA (1980bp) protein (660aa)
ABC transporter ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8Y2_9GAMM
ABC transporter ATPase {ECO:0000313|EMBL:EIL95923.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_307_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23984..24337
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8Y3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95924.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_307_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24450..25529
DNA (1080bp) protein (360aa)
agmatine deiminase n=1 Tax=Dyella ginsengisoli RepID=UPI000348F963
Peptidylarginine deiminase-like protein {ECO:0000313|EMBL:EIL99309.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
agmatine deiminase
SCNpilot_BF_INOC_scaffold_307_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25577..26467
DNA (891bp) protein (297aa)
Putative amidohydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8Y5_9GAMM
Putative amidohydrolase {ECO:0000313|EMBL:EIL95926.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
acyltransferase
SCNpilot_BF_INOC_scaffold_307_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26732..27964
DNA (1233bp) protein (411aa)
Pheromone shutdown-related protein TraB n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8Y6_9GAMM
Pheromone shutdown-related protein TraB {ECO:0000313|EMBL:EIL95927.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
pheromone shutdown-related protein TraB
SCNpilot_BF_INOC_scaffold_307_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28085..28420
DNA (336bp) protein (112aa)
cytochrome C n=1 Tax=Dyella ginsengisoli RepID=UPI0003460FE3
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AIF47877.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_307_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28432..28782
DNA (351bp) protein (117aa)
Cytochrome c553 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8Y8_9GAMM
Cytochrome c553 {ECO:0000313|EMBL:EIL95929.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;
cytochrome c553
SCNpilot_BF_INOC_scaffold_307_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28906..29514)
DNA (609bp) protein (203aa)
Fe/S biogenesis protein NfuA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6T5_9GAMM
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
thioredoxin-like protein
SCNpilot_BF_INOC_scaffold_307_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29669..30010
DNA (342bp) protein (114aa)
pterin-4a-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG8_9GAMM
SCNpilot_BF_INOC_scaffold_307_22
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30013..31518
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000301C3E2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16204.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_307_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31564..32568)
DNA (1005bp) protein (335aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY9_9GAMM
SCNpilot_BF_INOC_scaffold_307_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32911..35955
DNA (3045bp) protein (1015aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1379159 species="Bacteria; Proteobacteria; Ga
Ribonuclease E n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI69_9GAMM
ribonuclease E
SCNpilot_BF_INOC_scaffold_307_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36032..36685)
DNA (654bp) protein (218aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI68_9GAMM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EIL99159.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonad
histidine kinase
SCNpilot_BF_INOC_scaffold_307_26
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37228..37944)
DNA (717bp) protein (239aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiace
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003014641
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_BF_INOC_scaffold_307_27
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37941..38648)
DNA (708bp) protein (236aa)
nitrate reductase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000302AD12
respiratory nitrate reductase subunit gamma
Respiratory nitrate reductase subunit gamma {ECO:0000313|EMBL:AGK58307.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source
SCNpilot_BF_INOC_scaffold_307_28
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38683..39300)
DNA (618bp) protein (206aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BCP6_9RHIZ
nitrate reductase molybdenum cofactor assembly chaperone
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:AGK58306.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrob
SCNpilot_BF_INOC_scaffold_307_29
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39300..40841)
DNA (1542bp) protein (514aa)
Nitrate reductase A subunit beta n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDU8_9RHIZ
narH; nitrate reductase A subunit beta
Nitrate reductase A subunit beta {ECO:0000313|EMBL:AGK58305.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicr
SCNpilot_BF_INOC_scaffold_307_30
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40852..44610)
DNA (3759bp) protein (1253aa)
Respiratory nitrate reductase subunit alpha NarG n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B455_9RHIZ
Respiratory nitrate reductase subunit alpha NarG {ECO:0000313|EMBL:AGK58304.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" s
respiratory nitrate reductase subunit alpha NarG
Displaying items 1-30 of 120 in total

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