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SCNpilot_BF_INOC_scaffold_723

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_723_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..840)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95803.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
NrdJb
SCNpilot_BF_INOC_scaffold_723_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1101..1721)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDBAF
histidine biosynthesis protein HisIE
Uncharacterized protein {ECO:0000313|EMBL:AGG87587.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
SCNpilot_BF_INOC_scaffold_723_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1767..5051)
DNA (3285bp) protein (1095aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFS4_9GAMM
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EIL98315.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
ribonucleotide reductase, alpha subunit
SCNpilot_BF_INOC_scaffold_723_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5389..6771
DNA (1383bp) protein (461aa)
Protease Do n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN56_9GAMM
Protease Do {ECO:0000313|EMBL:EIL88647.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;
periplasmic serine protease, Do/DeqQ family
SCNpilot_BF_INOC_scaffold_723_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6928..8265
DNA (1338bp) protein (446aa)
Phosphate ABC transporter periplasmic protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN55_9GAMM
Phosphate ABC transporter periplasmic protein {ECO:0000313|EMBL:EIL88646.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
ABC-type phosphate transport system, periplasmic component
SCNpilot_BF_INOC_scaffold_723_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8270..8968
DNA (699bp) protein (233aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Rhodanobacter denitrificans RepID=M4NDP7_9GAMM
haloacid dehalogenase superfamily enzyme, subfamily IA
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:AGG87583.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobac
SCNpilot_BF_INOC_scaffold_723_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9067..10455
DNA (1389bp) protein (463aa)
Leucyl aminopeptidase n=2 Tax=Rhodanobacter denitrificans RepID=M4NCR2_9GAMM
leucyl aminopeptidase
Leucyl aminopeptidase {ECO:0000313|EMBL:AGG87582.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter deni
SCNpilot_BF_INOC_scaffold_723_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10605..12350
DNA (1746bp) protein (582aa)
Aminopeptidase N n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG6_9GAMM
Aminopeptidase N {ECO:0000313|EMBL:EIL89457.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.
aminopeptidase N
SCNpilot_BF_INOC_scaffold_723_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12598..13206)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000315819B
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF49547.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_723_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13375..15660)
DNA (2286bp) protein (762aa)
C-terminal processing peptidase n=3 Tax=Rhodanobacter denitrificans RepID=M4NCQ8_9GAMM
C-terminal processing peptidase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
C-terminal processing peptidase
SCNpilot_BF_INOC_scaffold_723_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15623..16642)
DNA (1020bp) protein (340aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG4_9GAMM
lipoate synthase
SCNpilot_BF_INOC_scaffold_723_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16653..17360)
DNA (708bp) protein (236aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAL4_9GAMM
lipoate-protein ligase B
SCNpilot_BF_INOC_scaffold_723_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17467..17757)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAP3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87574.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_BF_INOC_scaffold_723_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17757..19019)
DNA (1263bp) protein (421aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG1_9GAMM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EIL89452.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
penicillin-binding protein 6
SCNpilot_BF_INOC_scaffold_723_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19088..20020)
DNA (933bp) protein (311aa)
Rare lipoprotein A n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG0_9GAMM
Rare lipoprotein A {ECO:0000313|EMBL:EIL89451.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 11
lipoprotein
SCNpilot_BF_INOC_scaffold_723_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20017..21021)
DNA (1005bp) protein (335aa)
Lytic murein transglycosylase B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR0_9GAMM
Lytic murein transglycosylase B {ECO:0000313|EMBL:EIL89551.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
lytic murein transglycosylase
SCNpilot_BF_INOC_scaffold_723_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21125..22246)
DNA (1122bp) protein (374aa)
Rod shape-determining protein RodA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR1_9GAMM
cell elongation-specific peptidoglycan biosynthesis regulator RodA Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
cell elongation-specific peptidoglycan biosynthesis regulator RodA
SCNpilot_BF_INOC_scaffold_723_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22243..24222)
DNA (1980bp) protein (660aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQF7_9GAMM
Penicillin-binding protein 2 {ECO:0000313|EMBL:EIL89448.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
SCNpilot_BF_INOC_scaffold_723_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24238..24723)
DNA (486bp) protein (162aa)
Rod shape-determining protein MreD n=1 Tax=Rhodanobacter denitrificans RepID=M4NDN6_9GAMM
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:AGG87568.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
SCNpilot_BF_INOC_scaffold_723_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24720..25742)
DNA (1023bp) protein (341aa)
Cell shape-determining protein MreC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU3_9GAMM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
rod shape-determining protein MreC
SCNpilot_BF_INOC_scaffold_723_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25755..26738)
DNA (984bp) protein (328aa)
Rod shape-determining protein MreB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU4_9GAMM
Rod shape-determining protein MreB {ECO:0000313|EMBL:EIL98335.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
rod shape-determining protein MreB
SCNpilot_BF_INOC_scaffold_723_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27012..27947
DNA (936bp) protein (312aa)
Sugar kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFE8_9GAMM
Sugar kinase {ECO:0000313|EMBL:EIL98189.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
sugar kinase, ribokinase
SCNpilot_BF_INOC_scaffold_723_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28034..29536)
DNA (1503bp) protein (501aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU6_9GAMM
Displaying 23 items

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