ggKbase home page

SCNpilot_BF_INOC_scaffold_85

Search features with annotation key words

Displaying items 121-150 of 222 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_85_121

Not on your lists

comp(134293..134655)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CE1D1
ArsR family transcriptional regulator {ECO:0000313|EMBL:EQD77726.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metage
putative transcriptional regulator
SCNpilot_BF_INOC_scaffold_85_122
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134949..136778)
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJJ9_9GAMM
glucosamine--fructose-6-phosphate aminotransferase, isomerizing
SCNpilot_BF_INOC_scaffold_85_123
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136878..138248)
DNA (1371bp) protein (457aa)
cysteine synthase (EC:4.2.1.22)
Cysteine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJJ8_9GAMM
Cysteine synthase {ECO:0000313|EMBL:EIL87389.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115
SCNpilot_BF_INOC_scaffold_85_124
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138414..138641)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSQ4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87733.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_BF_INOC_scaffold_85_125
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139071..139676)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSQ5_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_85_126
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139673..140338)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93286.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_85_127
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140423..141547
DNA (1125bp) protein (375aa)
Twitching motility protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E4_9GAMM
Twitching motility protein {ECO:0000313|EMBL:EIL93285.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
twitching motility protein PilT
SCNpilot_BF_INOC_scaffold_85_128
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141569..141928)
DNA (360bp) protein (120aa)
PH adaptation potassium efflux system G transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ5_9GAMM
PH adaptation potassium efflux system G transmembrane protein {ECO:0000313|EMBL:EIL90536.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rh
multisubunit potassium/proton antiporter, PhaG subunit
SCNpilot_BF_INOC_scaffold_85_129
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141925..142206)
DNA (282bp) protein (94aa)
Putative monovalent cation/H+ antiporter subunit F n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ4_9GAMM
Putative monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:EIL90535.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
multisubunit Na+/H+ antiporter, MnhF subunit
SCNpilot_BF_INOC_scaffold_85_130
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142203..142688)
DNA (486bp) protein (162aa)
Putative monovalent cation/H+ antiporter subunit E n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ3_9GAMM
Putative monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:EIL90534.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
multisubunit Na+/H+ antiporter, MnhE subunit
SCNpilot_BF_INOC_scaffold_85_131
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142685..144229)
DNA (1545bp) protein (515aa)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ2_9GAMM
Putative monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:EIL90533.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
SCNpilot_BF_INOC_scaffold_85_132
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144226..144564)
DNA (339bp) protein (113aa)
Putative monovalent cation/H+ antiporter subunit C n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ1_9GAMM
Putative monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:EIL90532.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
multisubunit Na+/H+ antiporter, MnhC subunit
SCNpilot_BF_INOC_scaffold_85_133
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144564..147443)
DNA (2880bp) protein (960aa)
Putative monovalent cation/H+ antiporter subunit A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTJ0_9GAMM
Putative monovalent cation/H+ antiporter subunit A {ECO:0000313|EMBL:EIL90531.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
phaA; multicomponent K+:H+ antiporter subunit A
SCNpilot_BF_INOC_scaffold_85_134
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147638..148498
DNA (861bp) protein (287aa)
Universal stress protein UspA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTI9_9GAMM
Universal stress protein UspA {ECO:0000313|EMBL:EIL90530.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
universal stress protein UspA
SCNpilot_BF_INOC_scaffold_85_135
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148524..149180)
DNA (657bp) protein (219aa)
maleylacetoacetate isomerase (EC:5.2.1.2)
Maleylacetoacetate isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW2_9GAMM
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EIL91703.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
SCNpilot_BF_INOC_scaffold_85_136
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149313..150479
DNA (1167bp) protein (389aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1162282 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW1_9GAMM
phosphoglycerate kinase
SCNpilot_BF_INOC_scaffold_85_137
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150479..151111
DNA (633bp) protein (211aa)
haloacid dehalogenase n=1 Tax=Dyella japonica RepID=UPI0002DEB458
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AIF49400.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_85_138
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151178..153178)
DNA (2001bp) protein (667aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWF9_9GAMM
SCNpilot_BF_INOC_scaffold_85_139
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153415..154149
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003481FB4
autotransporter
Autotransporter {ECO:0000313|EMBL:AHX11991.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_85_140
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154385..154978
DNA (594bp) protein (198aa)
autotransporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034550B2
Uncharacterized protein {ECO:0000313|EMBL:EIL93279.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
opacity protein
SCNpilot_BF_INOC_scaffold_85_141
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155061..156065)
DNA (1005bp) protein (335aa)
Fructose-bisphosphate aldolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD4_9GAMM
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:EIL98525.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
fructose-bisphosphate aldolase rbh
SCNpilot_BF_INOC_scaffold_85_142
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156198..156638)
DNA (441bp) protein (147aa)
TonB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD3_9GAMM
Gram-negative bacterial tonB protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Gram-negative bacterial tonB protein
SCNpilot_BF_INOC_scaffold_85_143
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156721..158193)
DNA (1473bp) protein (491aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Pyruvate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD2_9GAMM
pyruvate kinase
SCNpilot_BF_INOC_scaffold_85_144
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158317..159138)
DNA (822bp) protein (274aa)
S1/P1 Nuclease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD1_9GAMM
S1/P1 Nuclease {ECO:0000313|EMBL:EIL98522.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydan
S1/P1 Nuclease
SCNpilot_BF_INOC_scaffold_85_145
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159229..159693)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D44ED1
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AIF49409.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_85_146
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159690..162926)
DNA (3237bp) protein (1079aa)
Acriflavin resistance protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VV84_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL91125.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
multidrug transporter AcrB
SCNpilot_BF_INOC_scaffold_85_147
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162923..164014)
DNA (1092bp) protein (364aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI51_9GAMM
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL86892.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
RND transporter
SCNpilot_BF_INOC_scaffold_85_148
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164038..164250)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY57_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_85_149
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164297..165571)
DNA (1275bp) protein (425aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI49_9GAMM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGI78473.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" so
pyridine nucleotide-disulfide oxidoreductase
SCNpilot_BF_INOC_scaffold_85_150
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165746..166117
DNA (372bp) protein (124aa)
ArsR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEU0_9GAMM
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGI78472.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="O
putative transcriptional regulator
Displaying items 121-150 of 222 in total

View Taxonomy