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SCNpilot_BF_INOC_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 222 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_85_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
Elongation factor Tu n=2 Tax=Rhodanobacter RepID=G4FZ48_9GAMM
translation elongation factor TU
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacter
SCNpilot_BF_INOC_scaffold_85_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(667..1167)
DNA (501bp) protein (167aa)
Acyl-CoA hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R6_9GAMM
Acyl-CoA hydrolase {ECO:0000313|EMBL:EIL93757.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathi
acyl-CoA hydrolase
SCNpilot_BF_INOC_scaffold_85_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1202..3205)
DNA (2004bp) protein (668aa)
Peptidase t2 asparaginase 2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R9_9GAMM
Peptidase t2 asparaginase 2 {ECO:0000313|EMBL:EIL93760.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
peptidase T
SCNpilot_BF_INOC_scaffold_85_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3353..3952
DNA (600bp) protein (200aa)
Two-component system regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S0_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EYR67012.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsi
transcriptional regulator
SCNpilot_BF_INOC_scaffold_85_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3930..4961
DNA (1032bp) protein (344aa)
histidine kinase n=1 Tax=Xanthomonas sacchari RepID=UPI00026300E7
Two-component system sensor protein {ECO:0000313|EMBL:EIL93762.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
histidine kinase
SCNpilot_BF_INOC_scaffold_85_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5051..8110
DNA (3060bp) protein (1020aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D6735
TonB-dependent receptor Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_85_7
unknown

Not on your lists

8147..9709
DNA (1563bp) protein (521aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_85_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9943..10131
DNA (189bp) protein (63aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=mine drainage metagenome RepID=T1CBY4_9ZZZZ
peptidase S9 prolyl oligopeptidase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_BF_INOC_scaffold_85_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10227..11318)
DNA (1092bp) protein (364aa)
GTP-binding protein YchF n=1 Tax=Dyella japonica RepID=UPI0002F60E30
ychF; GTP-binding protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangn
SCNpilot_BF_INOC_scaffold_85_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11402..11986)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S4_9GAMM
SCNpilot_BF_INOC_scaffold_85_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12041..12715)
DNA (675bp) protein (225aa)
50S ribosomal protein L25 n=1 Tax=Dyella ginsengisoli RepID=UPI000345573A
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1379159 s
SCNpilot_BF_INOC_scaffold_85_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12881..13822)
DNA (942bp) protein (314aa)
ribose-phosphate pyrophosphokinase n=1 Tax=Dyella ginsengisoli RepID=UPI00037B470F
ribose-phosphate pyrophosphokinase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ribose-phosphate pyrophosphokinase
SCNpilot_BF_INOC_scaffold_85_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14058..15455)
DNA (1398bp) protein (466aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W539_9GAMM
SCNpilot_BF_INOC_scaffold_85_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15484..16089)
DNA (606bp) protein (202aa)
Outer membrane lipoprotein LolB n=1 Tax=Rhodanobacter sp. 115 RepID=I4W540_9GAMM
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
outer membrane lipoprotein LolB
SCNpilot_BF_INOC_scaffold_85_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16086..17885)
DNA (1800bp) protein (600aa)
Flp pilus assembly protein TadD n=1 Tax=Rhodanobacter denitrificans RepID=M4NK11_9GAMM
Flp pilus assembly protein TadD
Flp pilus assembly protein TadD {ECO:0000313|EMBL:AGG88111.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
SCNpilot_BF_INOC_scaffold_85_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17953..19230
DNA (1278bp) protein (426aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WG32_9GAMM
SCNpilot_BF_INOC_scaffold_85_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19312..20391
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T1_9GAMM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
prfA; peptide chain release factor 1
SCNpilot_BF_INOC_scaffold_85_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20453..21223
DNA (771bp) protein (257aa)
Polyphosphate kinase 2, PA0141 family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T2_9GAMM
polyphosphate kinase
Polyphosphate kinase {ECO:0000313|EMBL:AHX14301.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_85_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21234..21500)
DNA (267bp) protein (89aa)
Acylphosphatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ21_9GAMM
Acylphosphatase {ECO:0000313|EMBL:EIL87212.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Ji
acylphosphatase
SCNpilot_BF_INOC_scaffold_85_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21500..21979)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EFC18D
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:EIM02682.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
thiol-disulfide isomerase-like thioredoxin
SCNpilot_BF_INOC_scaffold_85_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21976..23250)
DNA (1275bp) protein (425aa)
hypothetical protein (EC:3.1.-.-)
UPF0761 membrane protein rbn n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKP0_9GAMM
UPF0761 membrane protein rbn {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
SCNpilot_BF_INOC_scaffold_85_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23433..24032
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidored
NAD(P)H dehydrogenase (quinone) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ18_9GAMM
NAD(P)H-quinone oxidoreductase
SCNpilot_BF_INOC_scaffold_85_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24029..24376
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT93_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02685.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_85_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24408..24875
DNA (468bp) protein (156aa)
cupin n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002E8D9D7
cupin
Cupin {ECO:0000313|EMBL:AHX14309.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_85_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25022..26662
DNA (1641bp) protein (547aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT95_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIM02687.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp
acyl-CoA dehydrogenase
SCNpilot_BF_INOC_scaffold_85_26
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26662..27219
DNA (558bp) protein (186aa)
Adenylate kinase-like kinase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKG4_TERRK
adenylate kinase-like kinase
Adenylate kinase-like kinase {ECO:0000313|EMBL:AFL89732.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18
SCNpilot_BF_INOC_scaffold_85_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27304..27795
DNA (492bp) protein (164aa)
L-asparaginase/GlutRNAGln amidotransferase subunit D (EC:3.5.1.1)
Putative asparaginase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT97_9GAMM
Putative asparaginase {ECO:0000313|EMBL:EIM02689.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp.
SCNpilot_BF_INOC_scaffold_85_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27902..29197)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C8E8F
transporter rbh
Transporter {ECO:0000313|EMBL:AHX13567.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_85_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29194..29505)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDCF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX13568.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_85_30
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29509..32580)
DNA (3072bp) protein (1024aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FF74
Cytochrome C peroxidase {ECO:0000313|EMBL:KGI76679.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
CzcA family heavy metal efflux protein
Displaying items 1-30 of 222 in total

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