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SCNpilot_BF_INOC_scaffold_1133

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1133_1
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..238
DNA (237bp) protein (79aa)
parB partition protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI00036E8C1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP42528.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
SCNpilot_BF_INOC_scaffold_1133_2
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235..768
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EL24_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELA00223.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HM
hypothetical protein
SCNpilot_BF_INOC_scaffold_1133_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

952..1311
DNA (360bp) protein (120aa)
Peptidase s26, conserved region protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CJK7_PSEST
conjugal transfer protein TraF
Peptidase {ECO:0000313|EMBL:EWC39955.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
SCNpilot_BF_INOC_scaffold_1133_4
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1748..3745
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDQ3_PSEAI
Type VI secretion protein {ECO:0000313|EMBL:KGM52069.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concr
type VI secretion protein
SCNpilot_BF_INOC_scaffold_1133_5
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3801..5168)
DNA (1368bp) protein (456aa)
Putative transcriptional regulatory protein PtsJ n=1 Tax=Halomonas sp. A3H3 RepID=T2L7U4_9GAMM
Putative transcriptional regulatory protein PtsJ {ECO:0000313|EMBL:CDG53168.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" so
transcriptional regulatory protein PtsJ
SCNpilot_BF_INOC_scaffold_1133_6
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5218..6111
DNA (894bp) protein (298aa)
dihydrodipicolinate synthase n=1 Tax=Halomonas lutea RepID=UPI00035F73FA
Uncharacterized protein {ECO:0000313|EMBL:CDG53169.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. A3H3.
dapA; dihydrodipicolinate synthase rbh
SCNpilot_BF_INOC_scaffold_1133_7
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6146..7378
DNA (1233bp) protein (411aa)
Putative major facilitator superfamily transporter n=1 Tax=Halomonas sp. A3H3 RepID=T2L8P6_9GAMM
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:CDG53170.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_1133_8
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7427..8743)
DNA (1317bp) protein (439aa)
L-lactate permease n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y283_PARAH
L-lactate permease
L-lactate permease {ECO:0000313|EMBL:AGT09865.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus
SCNpilot_BF_INOC_scaffold_1133_9
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8946..9275)
DNA (330bp) protein (110aa)
Antioxidant, AhpC/TSA family n=2 Tax=Nitrosococcus oceani RepID=B6C1N3_9GAMM
hypothetical protein
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KFI19596.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oc
SCNpilot_BF_INOC_scaffold_1133_10
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9241..9507)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TDM4_9GAMM
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KFX69718.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
thioredoxin
SCNpilot_BF_INOC_scaffold_1133_11
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9610..9846)
DNA (237bp) protein (79aa)
Thioredoxin n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z498_9RHOO
Thioredoxin {ECO:0000313|EMBL:CDI01602.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitr
hypothetical protein
SCNpilot_BF_INOC_scaffold_1133_12
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9957..11258)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000381A9F1
GntR family transcription regulator protein {ECO:0000313|EMBL:EZP38943.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" so
GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1133_13
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11365..12180
DNA (816bp) protein (272aa)
Alanine racemase n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U7V4_ADVKW
putative pyridoxal-phosphate protein, YggS Family
Putative pyridoxal-phosphate protein, YggS Family {ECO:0000313|EMBL:AHG62452.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenel
SCNpilot_BF_INOC_scaffold_1133_14
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12177..14342
DNA (2166bp) protein (722aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1470558 species="Bacteria; Pro
Acetylornithine aminotransferase n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5ARL6_PSEAI
acetylornithine and succinylornithine aminotransferase
SCNpilot_BF_INOC_scaffold_1133_15
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14401..15672
DNA (1272bp) protein (424aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PCC21 RepID=J7L364_PECCC
glycine hydroxymethyltransferase
SCNpilot_BF_INOC_scaffold_1133_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15688..16632
DNA (945bp) protein (315aa)
Transcriptional regulator n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WFB8_PSEAI
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB83968.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
SCNpilot_BF_INOC_scaffold_1133_17
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16629..16907
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WFV4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EXI88108.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1133_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17144..19549
DNA (2406bp) protein (802aa)
Conjugal transfer protein TraG n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL69_BORPD
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAO26443.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
conjugal transfer protein TraG
SCNpilot_BF_INOC_scaffold_1133_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19546..20595
DNA (1050bp) protein (350aa)
P-type conjugative transfer ATPase TrbB n=3 Tax=Pseudomonas aeruginosa RepID=U8YMQ2_PSEAI
Putative conjugal transfer protein TrbB {ECO:0000313|EMBL:CEI04072.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
trbB; Conjugative transfer protein TrbB rbh
SCNpilot_BF_INOC_scaffold_1133_20
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20592..20984
DNA (393bp) protein (131aa)
TrbC-like protein n=3 Tax=Pseudomonas aeruginosa RepID=U8YSE5_PSEAI
conjugal transfer protein TrbC
Conjugal transfer protein TrbC {ECO:0000313|EMBL:BAP44838.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
SCNpilot_BF_INOC_scaffold_1133_21
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20981..21253
DNA (273bp) protein (91aa)
conjugal transfer protein TrbD n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381E1AD
conjugal transfer protein TrbB
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KGM52058.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter
SCNpilot_BF_INOC_scaffold_1133_22
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21266..23290
DNA (2025bp) protein (675aa)
Conjugal transfer ATPase TrbE n=1 Tax=Pseudomonas aeruginosa JJ692 RepID=U9PMF8_PSEAI
Conjugal transfer protein TrbE {ECO:0000313|EMBL:EPZ14906.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 5
trbE; conjugal transfer ATPase TrbE
Displaying 22 items

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