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SCNpilot_BF_INOC_scaffold_823

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_823_1
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..224)
DNA (222bp) protein (74aa)
conjugal transfer protein TrbC n=1 Tax=Thiobacillus denitrificans RepID=UPI0003665B36
conjugal transfer protein TrbC
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AJP47676.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1
SCNpilot_BF_INOC_scaffold_823_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221..1237)
DNA (1017bp) protein (339aa)
conjugal transfer protein TrbB n=1 Tax=Thiobacillus denitrificans RepID=UPI000374E989
type II secretion system protein E; K03196 type IV secretion system protein VirB11 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
conjugal transfer protein TrbB
SCNpilot_BF_INOC_scaffold_823_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1234..1722)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F80A4
CopG domain-containing protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
CopG family transcriptional regulator
SCNpilot_BF_INOC_scaffold_823_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1719..3710)
DNA (1992bp) protein (664aa)
conjugal transfer protein TraG n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C7ECF
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
conjugal transfer protein TraG
SCNpilot_BF_INOC_scaffold_823_5
unknown

Not on your lists

comp(4231..4353)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_823_6
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4403..6031
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036AA3BA
adenine specific DNA methylase Mod
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:AFL75953.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis vio
SCNpilot_BF_INOC_scaffold_823_7
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6028..8457
DNA (2430bp) protein (810aa)
DNA/RNA helicase, superfamily II id=4140585 bin=GWF2_Geobacter_54_21 species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
DNA/RNA helicase Tax=GWC2_Geobacteraceae_55_20_curated
DNA/RNA helicase
SCNpilot_BF_INOC_scaffold_823_8
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8621..9646
DNA (1026bp) protein (342aa)
Uncharacterized protein n=2 Tax=Ralstonia RepID=E2SYG8_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EGY63058.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
hypothetical protein
SCNpilot_BF_INOC_scaffold_823_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10013..10300)
DNA (288bp) protein (96aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003671370
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
histone family protein DNA-binding protein
SCNpilot_BF_INOC_scaffold_823_10
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10487..12430)
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DE09
hypothetical protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_823_11
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12749..13273)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743BE1
peptidase
Peptidase {ECO:0000313|EMBL:AJP47689.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_823_12
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13270..13803)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0AB2
transposase
Transposase {ECO:0000313|EMBL:AJP47690.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_823_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13800..14045)
DNA (246bp) protein (82aa)
parB partition protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E0639
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
parB partition protein
SCNpilot_BF_INOC_scaffold_823_14
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14042..14680)
DNA (639bp) protein (213aa)
ParA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC195
ATPase
ATPase {ECO:0000313|EMBL:AJP47692.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_823_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14886..15767)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D8D51
putative replication initiator and transcription repressor protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RepA replication protein
SCNpilot_BF_INOC_scaffold_823_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15790..16089)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003680820
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_823_17
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16197..17033)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F317D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47694.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_823_18
unknown

Not on your lists

17214..17813
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_823_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17921..18208
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA028 RepID=U8NK25_PSEAI
transcription regulator (helix turn helix motif) XRE family Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transcription regulator (helix turn helix motif) XRE family
SCNpilot_BF_INOC_scaffold_823_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18251..18595)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003645152
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transposase
SCNpilot_BF_INOC_scaffold_823_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19066..20115)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DE802
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_823_22
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20211..20522
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034CA7A4
Transcriptional regulator ArsR family {ECO:0000313|EMBL:ELX10973.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source
ArsR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_823_23
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20522..21493
DNA (972bp) protein (324aa)
Cation diffusion facilitator family transporter n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRI3_SIDLE
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ADE11569.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" sour
SCNpilot_BF_INOC_scaffold_823_24
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21928..22311)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T4M6_META2
Uncharacterized protein {ECO:0000313|EMBL:CCE25782.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
hypothetical protein
SCNpilot_BF_INOC_scaffold_823_25
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22537..23727
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Leptospira interrogans serovar Valbuzzi RepID=M6A018_LEPIR
Uncharacterized protein {ECO:0000313|EMBL:ETY81268.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia cari
hypothetical protein
SCNpilot_BF_INOC_scaffold_823_26
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(23988..24458)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYM4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCW35524.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas cal
SCNpilot_BF_INOC_scaffold_823_27
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24660..25004)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362200E
hypothetical protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_823_28
unknown

Not on your lists

comp(25036..25164)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_823_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25239..25544)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363A93E
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
Displaying 29 items

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