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SCNpilot_bf_inoc_scaffold_997_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_997_curated_1
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(480..1643)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G6D0_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_bf_inoc_scaffold_997_curated_2
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(1651..2688)
DNA (1038bp) protein (346aa)
DNA methyltransferase id=15190150 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA methyltransferase
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_bf_inoc_scaffold_997_curated_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3015..3776)
DNA (762bp) protein (254aa)
Uncharacterized protein id=3542352 bin=GWF2_Bacteroidetes_41_31 species=Bergeyella zoohelcum genus=Bergeyella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
fic family protein
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_bf_inoc_scaffold_997_curated_4
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3847..4617)
DNA (771bp) protein (257aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F196_EMTOG
filamentation induced by cAMP protein Fic
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_997_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4889..6892)
DNA (2004bp) protein (668aa)
1,4-alpha-glucan-branching protein (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
1,4-alpha-glucan branching enzyme n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4I1_PALPW
SCNpilot_bf_inoc_scaffold_997_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7027..7698)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4I3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79627.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_997_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


7841..8860
DNA (1020bp) protein (340aa)
phenylalanyL-tRNA synthetase, alpha subunit (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016844};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4I4_PALPW
SCNpilot_bf_inoc_scaffold_997_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8917..9987)
DNA (1071bp) protein (357aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J1_PALPW
SCNpilot_bf_inoc_scaffold_997_curated_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10003..11043)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5SRD6_9BACE
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_997_curated_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11058..14096)
DNA (3039bp) protein (1013aa)
Fibronectin type III domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J2_PALPW
fibronectin type IIii domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ADQ79636.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_997_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14093..14641)
DNA (549bp) protein (183aa)
N-acetylmuramyL-L-alanine amidase, negative regulator of ampc, ampd; K11066 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T838_PALPW
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ADQ80882.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_997_curated_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14728..15168)
DNA (441bp) protein (147aa)
Putative integral membrane protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T839_PALPW
integral membrane protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_997_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15172..16110)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T840_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80884.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_997_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16145..18238)
DNA (2094bp) protein (698aa)
peptidyL-dipeptidase dcp (EC:3.4.15.5); K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5]
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:ADQ80885.1}; EC=3.4.15.5 {ECO:0000313|EMBL:ADQ80885.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Peptidyl-dipeptidase Dcp n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T841_PALPW
SCNpilot_bf_inoc_scaffold_997_curated_15
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18672..19112
DNA (441bp) protein (147aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7X589_9PORP
Uncharacterized protein {ECO:0000313|EMBL:BAR49508.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_997_curated_16
unknown

Not on your lists

19094..19873
DNA (780bp) protein (260aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_997_curated_17
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20014..21225
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9QSH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY32681.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_997_curated_18
unknown

Not on your lists

21446..21583
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_997_curated_19
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21601..22755
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FH48_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB08714.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_997_curated_20
unknown

Not on your lists

22778..22945
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_997_curated_21
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22957..23847
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9QU22_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY33261.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_997_curated_22
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23930..25444
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6Z9M5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD40234.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
SCNpilot_bf_inoc_scaffold_997_curated_23
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25620..27836
DNA (2217bp) protein (739aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6AUE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KFC59650.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
thiol:disulfide interchange protein rbh
SCNpilot_bf_inoc_scaffold_997_curated_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28251..29471
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FUP0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA83041.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_997_curated_25
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29614..30360
DNA (747bp) protein (249aa)
Sulphatase-modifying factor protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUY5_HALH1
sulfatase-modifying factor protein
Sulphatase-modifying factor protein {ECO:0000313|EMBL:AEE48161.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_bf_inoc_scaffold_997_curated_26
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30584..31666
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NZ53_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02132.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_997_curated_27
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31707..32891
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B1D3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS17139.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_997_curated_28
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32881..34062
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D5938
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY34600.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
SCNpilot_bf_inoc_scaffold_997_curated_29
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34236..35453
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UQD6_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW19736.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
Displaying 29 items

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