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SCNpilot_bf_inoc_scaffold_1827_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1827_curated_1
unknown

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comp(1..210)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1827_curated_2
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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374..574
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361DD2B
CsbD family protein {ECO:0000313|EMBL:CDS94597.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
CsbD family protein
SCNpilot_bf_inoc_scaffold_1827_curated_3
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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942..1313
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D8L9_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK66364.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
SCNpilot_bf_inoc_scaffold_1827_curated_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1565..2359
DNA (795bp) protein (265aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
thiM; hydroxyethylthiazole kinase ThiM (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZX2_9PORP
SCNpilot_bf_inoc_scaffold_1827_curated_5
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2356..2994
DNA (639bp) protein (213aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossi
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
thiamine-phosphate pyrophosphorylase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381BD6E
SCNpilot_bf_inoc_scaffold_1827_curated_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2991..3653
DNA (663bp) protein (221aa)
TENA/THI-4 family protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZX0_9PORP
TENA/THI-4 family protein {ECO:0000313|EMBL:EGK01115.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
putative transcription activator
SCNpilot_bf_inoc_scaffold_1827_curated_7
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3666..4475
DNA (810bp) protein (270aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Phosphomethylpyrimidine kinase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZW9_9PORP
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EGK01114.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_1827_curated_8
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4523..5023)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DXA7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ERI86272.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1827_curated_9
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5179..5580
DNA (402bp) protein (134aa)
CTP pyrophosphohydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Mutator mutT protein n=3 Tax=Bacteroides RepID=E4VY93_BACFG
7 8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:CCZ38799.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
SCNpilot_bf_inoc_scaffold_1827_curated_10
Plasmodium inui, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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5674..6210
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1PA76_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EUD64262.1}; Flags: Fragment;; TaxID=1237626 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).;" source="Plasmodium inui San Antonio 1.;"
SCNpilot_bf_inoc_scaffold_1827_curated_11
unknown

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comp(6294..6848)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1827_curated_12
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6917..8719)
DNA (1803bp) protein (601aa)
cbiD; cobalamin biosynthesis protein CbiD; K02188 cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
Cobalamin biosynthesis protein CbiD n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UMV1_TANFA
SCNpilot_bf_inoc_scaffold_1827_curated_13
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8716..10479)
DNA (1764bp) protein (588aa)
Precorrin-4 C(11)-methyltransferase {ECO:0000313|EMBL:EEO60881.1}; EC=2.1.1.133 {ECO:0000313|EMBL:EEO60881.1};; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
Precorrin-4 C(11)-methyltransferase n=4 Tax=Bacteroides RepID=C3Q0L4_9BACE
precorrin-4 C(11)-methyltransferase
Displaying 13 items

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