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SCNpilot_bf_inoc_scaffold_404_curated

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_404_curated_31
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26363..26740
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZXS6_ORNRL
Uncharacterized protein {ECO:0000313|EMBL:ETK06953.1}; TaxID=1411022 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 1/3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_404_curated_32
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26746..27786
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBF1_PEDSD
hypothetical protein
Tax=RBG_13_Bacteroidetes_42_15_curated
SCNpilot_bf_inoc_scaffold_404_curated_33
unknown

Not on your lists

27826..27957
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_404_curated_34
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28212..28646
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK12248.1}; TaxID=1411915 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 8/11.;"
SCNpilot_bf_inoc_scaffold_404_curated_35
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28653..29795
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UM84_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW21389.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_bf_inoc_scaffold_404_curated_36
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29853..30860
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UM84_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW21389.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_bf_inoc_scaffold_404_curated_37
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(30946..31533)
DNA (588bp) protein (196aa)
30S ribosomal protein S16 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Z7_PALPW
SSU ribosomal protein s16p; K02959 small subunit ribosomal protein S16
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_404_curated_38
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31630..32520)
DNA (891bp) protein (297aa)
Sporulation domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Z8_PALPW
sporulation domaiN-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:ADQ79442.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_404_curated_39
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32673..33725
DNA (1053bp) protein (351aa)
dtdp-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Z9_PALPW
SCNpilot_bf_inoc_scaffold_404_curated_40
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33824..34291
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8I4_PALPW
hypothetical protein; K09748 ribosome maturation factor RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_404_curated_41
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34295..35557
DNA (1263bp) protein (421aa)
NusA antitermination factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8I3_PALPW
nusa antitermination factor; K02600 N utilization substance protein A
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_404_curated_42
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35636..38662
DNA (3027bp) protein (1009aa)
Translation initiation factor IF-2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8I2_PALPW
bacterial translation initiation factor 2 (bif-2); K02519 translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_404_curated_43
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38832..41387)
DNA (2556bp) protein (852aa)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:ADQ78313.1}; EC=2.4.1.1 {ECO:0000313|EMBL:ADQ78313.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-glucan phosphorylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F4_PALPW
SCNpilot_bf_inoc_scaffold_404_curated_44
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41499..43145)
DNA (1647bp) protein (549aa)
glycogen(starch) synthase (EC:2.4.1.11)
Glycogen(Starch) synthase {ECO:0000313|EMBL:ADQ78312.1}; EC=2.4.1.11 {ECO:0000313|EMBL:ADQ78312.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glycogen(Starch) synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F3_PALPW
SCNpilot_bf_inoc_scaffold_404_curated_45
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43346..44275)
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2G7_PALPW
hypothetical protein; K07139
Uncharacterized protein {ECO:0000313|EMBL:ADQ78911.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_404_curated_46
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44364..45620)
DNA (1257bp) protein (419aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T116_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78397.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_404_curated_47
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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45744..47693
DNA (1950bp) protein (650aa)
1-deoxy-d-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
1-deoxy-D-xylulose-5-phosphate synthase id=3076715 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_bf_inoc_scaffold_404_curated_48
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47805..49139
DNA (1335bp) protein (445aa)
Potassium uptake protein TrkA id=3076795 bin=GWF2_Bacteroidetes_49_14 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
trkA; potassium transporter peripheral membrane protein; K03499 trk system potassium uptake protein TrkA rbh
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_bf_inoc_scaffold_404_curated_49
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49139..50608
DNA (1470bp) protein (490aa)
Potassium uptake protein TrkH id=3076796 bin=GWF2_Bacteroidetes_49_14 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
potassium uptake protein; K03498 trk system potassium uptake protein TrkH
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_bf_inoc_scaffold_404_curated_50
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50742..51146
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RWT4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59878.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_404_curated_51
unknown

Not on your lists

51238..51627
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_404_curated_52
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

51634..52929
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2IXQ9_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_bf_inoc_scaffold_404_curated_53
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53015..59107
DNA (6093bp) protein (2031aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RVQ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59876.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
RHS repeat-associated core domain-containing protein
SCNpilot_bf_inoc_scaffold_404_curated_54
unknown

Not on your lists

59125..59685
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_404_curated_55
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59816..61030
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RVQ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59876.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
RHS repeat-associated core domain-containing protein
SCNpilot_bf_inoc_scaffold_404_curated_56
unknown

Not on your lists

61042..61122
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying items 31-56 of 56 in total

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