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SCNpilot_bf_inoc_scaffold_338_curated

Search features with annotation key words

Displaying items 31-46 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_338_curated_31
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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40887..41423
DNA (537bp) protein (179aa)
Chromate transport protein n=1 Tax=gut metagenome RepID=J9G4X8_9ZZZZ
Chromate transporter {ECO:0000313|EMBL:KIO44571.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
putative chromate transport protein; K07240 chromate transporter
SCNpilot_bf_inoc_scaffold_338_curated_32
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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41452..42585
DNA (1134bp) protein (378aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-); K13747 carboxynorspermidine decarboxylase [EC:4.1.1.-]
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:ADQ80952.1}; EC=4.1.1.- {ECO:0000313|EMBL:ADQ80952.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Carboxynorspermidine decarboxylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8A8_PALPW
SCNpilot_bf_inoc_scaffold_338_curated_33
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(42646..44550)
DNA (1905bp) protein (635aa)
ATP-dependent DNA helicase recq (EC:3.6.1.-); K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ADQ80953.1}; EC=3.6.1.- {ECO:0000313|EMBL:ADQ80953.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
ATP-dependent DNA helicase RecQ n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8A9_PALPW
SCNpilot_bf_inoc_scaffold_338_curated_34
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(44592..44936)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J2Z1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAZ96725.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_338_curated_35
unknown

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comp(44914..45096)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_338_curated_36
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(45145..45339)
DNA (195bp) protein (65aa)
2Fe-2S iron-sulfur cluster-binding domain protein id=4413294 bin=GWF2_Bacteroidetes_41_61 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
BFD domain protein (2Fe-2S)-binding domain-containing protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_338_curated_37
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(45476..46387)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y4R7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA22393.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_338_curated_38
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(46433..47899)
DNA (1467bp) protein (489aa)
Conserved domain protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YCE4_9BACE
Conserved domain protein {ECO:0000313|EMBL:CDA22394.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
SCNpilot_bf_inoc_scaffold_338_curated_39
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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48083..49735
DNA (1653bp) protein (551aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8B6_PALPW
peptidase s8 and s53 subtilisin kexin sedolisin
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_338_curated_40
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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49742..50989
DNA (1248bp) protein (416aa)
exonuclease vii, large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exonuclease VII, large subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8B7_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_338_curated_41
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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50973..51971
DNA (999bp) protein (333aa)
Glycosyltransferase 28 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6M9_PALPW
glycosyltransferase 28 domain protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_338_curated_42
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(52016..53203)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6N1_PALPW
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_338_curated_43
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53243..53803
DNA (561bp) protein (187aa)
Colicin V production protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6N2_PALPW
colicin v production protein; K03558 membrane protein required for colicin V production
Colicin V production protein {ECO:0000313|EMBL:ADQ80376.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_338_curated_44
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53805..54380
DNA (576bp) protein (192aa)
RNAse hii (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ribonuclease HII n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6N3_PALPW
SCNpilot_bf_inoc_scaffold_338_curated_45
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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54403..56517
DNA (2115bp) protein (705aa)
Peptidase S46 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T869_PALPW
peptidase s46
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_338_curated_46
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(56514..56837)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T891_PALPW
hypothetical protein
Tax=CG_Paludi_01
Displaying items 31-46 of 46 in total

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