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SCNpilot_bf_inoc_scaffold_595_curated

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_595_curated_1
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..611
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2SJD0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL65552.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_595_curated_2
unknown

Not on your lists

665..1180
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_595_curated_3
unknown

Not on your lists

1198..1854
DNA (657bp) protein (219aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_595_curated_4
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1921..3039
DNA (1119bp) protein (373aa)
Putative uncharacterized protein id=4001902 bin=GWF2_Bacteroidetes_38_335 species=Prevotella marshii genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
SCNpilot_bf_inoc_scaffold_595_curated_5
Prevotella denticola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3338..4021
DNA (684bp) protein (228aa)
Isjp4 transposase n=1 Tax=gut metagenome RepID=J9G5U9_9ZZZZ
Transposase {ECO:0000313|EMBL:KGF42563.1}; TaxID=1401077 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella denticola DNF00960.;"
transposase
SCNpilot_bf_inoc_scaffold_595_curated_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4632..4820
DNA (189bp) protein (63aa)
hypothetical protein ANA_C20489 id=3827470 bin=GWC2_Bacteroidetes_40_13 species=Anabaena sp. 90 genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_bf_inoc_scaffold_595_curated_7
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5076..5369
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6R7L0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA52179.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_595_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5517..7595)
DNA (2079bp) protein (693aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T216_PALPW
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADQ78760.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_595_curated_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7564..9876)
DNA (2313bp) protein (771aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Peptidoglycan glycosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T217_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_595_curated_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9973..11109)
DNA (1137bp) protein (379aa)
oxygeN-independent coproporphyrinogen iii oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T218_PALPW
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ADQ78762.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_595_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11110..11982)
DNA (873bp) protein (291aa)
(acyL-carrier-protein) s-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T299_PALPW
SCNpilot_bf_inoc_scaffold_595_curated_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12333..12962
DNA (630bp) protein (210aa)
16S rRNA m(7)g-527 methyltransferase (EC:2.1.1.-); K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T298_PALPW
SCNpilot_bf_inoc_scaffold_595_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


13023..14768
DNA (1746bp) protein (582aa)
aspartyL-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ADQ78844.1}; EC=6.1.1.12 {ECO:0000313|EMBL:ADQ78844.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Aspartate--tRNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2A0_PALPW
SCNpilot_bf_inoc_scaffold_595_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15330..18632
DNA (3303bp) protein (1101aa)
Protein translocase subunit SecA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E6_PALPW
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
protein translocase subunit seca; K03070 preprotein translocase subunit SecA
SCNpilot_bf_inoc_scaffold_595_curated_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18675..19475
DNA (801bp) protein (267aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E5_PALPW
prolipoprotein diacylglyceryl transferase
SCNpilot_bf_inoc_scaffold_595_curated_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19472..20215
DNA (744bp) protein (248aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E4_PALPW
SCNpilot_bf_inoc_scaffold_595_curated_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20217..20765)
DNA (549bp) protein (183aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U7_PALPW
biotin/lipoyl attachment domaiN-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ADQ78691.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_595_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20770..22269)
DNA (1500bp) protein (500aa)
carbamoyL-phosphate synthase l chain ATP-binding protein (EC:6.4.1.1); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADQ78690.1}; EC=6.4.1.1 {ECO:0000313|EMBL:ADQ78690.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U6_PALPW
SCNpilot_bf_inoc_scaffold_595_curated_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22321..23856)
DNA (1536bp) protein (512aa)
propionyL-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3)
Propionyl-CoA carboxylase carboxyltransferase subunit {ECO:0000313|EMBL:ADQ78689.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ADQ78689.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U5_PALPW
SCNpilot_bf_inoc_scaffold_595_curated_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23920..24597)
DNA (678bp) protein (226aa)
Putative uncharacterized protein id=4155084 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein; K07150
Uncharacterized protein {ECO:0000313|EMBL:ADQ78686.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_595_curated_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25264..28143
DNA (2880bp) protein (960aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78682.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_595_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28329..28553
DNA (225bp) protein (75aa)
hypothetical protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T6_PALPW
Uncharacterized protein {ECO:0000313|EMBL:ADQ78680.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_595_curated_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28550..29641
DNA (1092bp) protein (364aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T5_PALPW
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ADQ78679.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_595_curated_24
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29663..30454
DNA (792bp) protein (264aa)
thiamine pyrophosphate tpp-binding domaiN-containing protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
Thiamine pyrophosphate TPP-binding domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T4_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_595_curated_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30623..31165
DNA (543bp) protein (181aa)
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.3); K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:ADQ78677.1}; EC=1.2.7.3 {ECO:0000313|EMBL:ADQ78677.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T3_PALPW
SCNpilot_bf_inoc_scaffold_595_curated_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31152..31994)
DNA (843bp) protein (281aa)
(LSU ribosomal protein l11p)-lysine N-methyltransferase (EC:2.1.1.-); K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ribosomal protein L11 methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T2_PALPW
SCNpilot_bf_inoc_scaffold_595_curated_27
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32466..32978
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2SJD0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL65552.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_595_curated_28
unknown

Not on your lists

33033..33479
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_595_curated_29
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33482..34105
DNA (624bp) protein (208aa)
CHU large protein id=4610594 bin=GWF2_Bacteroidetes_33_38 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Tax=GWA2_Bacteroidetes_30_7_curated
SCNpilot_bf_inoc_scaffold_595_curated_30
unknown

Not on your lists

34120..34950
DNA (831bp) protein (277aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

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