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SCNpilot_bf_inoc_scaffold_199_curated

Search features with annotation key words

Displaying items 31-60 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_199_curated_31
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39991..41469)
DNA (1479bp) protein (493aa)
Protease Do n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A1_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_199_curated_32
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41705..43036)
DNA (1332bp) protein (444aa)
glutamate dehydrogenase (nad) (EC:1.4.1.2 1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
Glutamate dehydrogenase n=3 Tax=Porphyromonadaceae RepID=G9S6A7_9PORP
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
SCNpilot_bf_inoc_scaffold_199_curated_33
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43352..44725
DNA (1374bp) protein (458aa)
Amino acid/peptide transporter (Peptide:H+ symporter) n=2 Tax=Bergeyella zoohelcum RepID=K1LT70_9FLAO
Amino acid/peptide transporter (Peptide:H+ symporter) {ECO:0000313|EMBL:EKB58171.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
Dipeptide/tripeptide permease; K03305 proton-dependent oligopeptide transporter, POT family
SCNpilot_bf_inoc_scaffold_199_curated_34
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44705..45682)
DNA (978bp) protein (326aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3C2_PALPW
ABC transporter related protein {ECO:0000313|EMBL:ADQ79216.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_199_curated_35
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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45750..48284
DNA (2535bp) protein (845aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0Y5_PALPW
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:ADQ78366.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
cell division protein ftsk/spoiiie; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_bf_inoc_scaffold_199_curated_36
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48289..48930
DNA (642bp) protein (214aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0Y6_PALPW
outer membrane lipoprotein carrier protein lola
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_199_curated_37
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49006..49938
DNA (933bp) protein (311aa)
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Thioredoxin reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0Y7_PALPW
SCNpilot_bf_inoc_scaffold_199_curated_38
unknown

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comp(50159..50656)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_199_curated_39
Prevotella oris, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50705..51853)
DNA (1149bp) protein (383aa)
DNA adenine methylase (dam) (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Prevotella oris C735 RepID=D7NF42_9BACT
DNA adenine methylase {ECO:0000313|EMBL:EFI47889.1}; TaxID=563008 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oris C735.;"
SCNpilot_bf_inoc_scaffold_199_curated_40
Desulfurella acetivorans, Desulfurella, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(51856..52560)
DNA (705bp) protein (235aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=694431 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Desulfurella.;" source="Desulfurella acetivorans A63.;"
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Prevotella disiens JCM 6334 = ATCC 29426 RepID=U2IGS1_9BACT
adenine specific DNA methyltransferase (putative type II)
SCNpilot_bf_inoc_scaffold_199_curated_41
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(52561..53379)
DNA (819bp) protein (273aa)
MjaII restriction endonuclease n=1 Tax=Prevotella sp. oral taxon 317 str. F0108 RepID=D3IK94_9BACT
hypothetical protein
Tax=CG_Pacearch_06
SCNpilot_bf_inoc_scaffold_199_curated_42
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53729..53950)
DNA (222bp) protein (74aa)
Uncharacterized protein id=3538836 bin=GWF2_Bacteroidetes_49_14 species=Bacteroides ovatus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Fic
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_bf_inoc_scaffold_199_curated_43
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54043..54930)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C1V5_9FLAO
Dioxygenase {ECO:0000313|EMBL:KJJ38822.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_199_curated_44
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54976..56367)
DNA (1392bp) protein (464aa)
Nodulation efficiency protein D n=2 Tax=Parabacteroides johnsonii RepID=B7BCR8_9PORP
membrane-bound serine protease; K07403 membrane-bound serine protease (ClpP class)
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_199_curated_45
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56590..57096
DNA (507bp) protein (169aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1J2_PALPW
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADQ78586.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_199_curated_46
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57196..57588
DNA (393bp) protein (131aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1J1_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_199_curated_47
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57693..58259)
DNA (567bp) protein (189aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase n=3 Tax=Parabacteroides RepID=K5ZDN0_9PORP
SCNpilot_bf_inoc_scaffold_199_curated_48
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58767..60476)
DNA (1710bp) protein (570aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWH8_9PORP
SCNpilot_bf_inoc_scaffold_199_curated_49
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60805..61506)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWH9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06313.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
two component transcriptional regulator, winged helix family
SCNpilot_bf_inoc_scaffold_199_curated_50
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61551..62228)
DNA (678bp) protein (226aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWI0_9PORP
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
transcriptional regulator; K02039 phosphate transport system protein
SCNpilot_bf_inoc_scaffold_199_curated_51
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62259..63005)
DNA (747bp) protein (249aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
phosphate ABC transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Phosphate import ATP-binding protein pstB n=1 Tax=Alistipes sp. CAG:157 RepID=R5WD15_9BACT
SCNpilot_bf_inoc_scaffold_199_curated_52
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63024..63878)
DNA (855bp) protein (285aa)
Phosphate ABC transporter, permease PstA n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWI2_9PORP
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:EGK06316.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
phosphate ABC transporter membrane protein 2, phot family; K02038 phosphate transport system permease protein
SCNpilot_bf_inoc_scaffold_199_curated_53
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63881..65095)
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWI3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06317.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
ABC transporter permease; K02037 phosphate transport system permease protein
SCNpilot_bf_inoc_scaffold_199_curated_54
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65127..65942)
DNA (816bp) protein (272aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Porphyromonas gulae RepID=UPI0003765DC9
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGN70316.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_199_curated_55
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66026..67201)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Porphyromonas gulae RepID=UPI00036514CF
Uncharacterized protein {ECO:0000313|EMBL:KGN70314.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_199_curated_56
unknown

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67237..67353
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_199_curated_57
unknown

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comp(67400..68410)
DNA (1011bp) protein (337aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_199_curated_58
unknown

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comp(68423..69559)
DNA (1137bp) protein (379aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_199_curated_59
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69669..71636)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. AS15 RepID=J4THS2_9FIRM
kwg repeat protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_199_curated_60
unknown

Not on your lists

72001..72162
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying items 31-60 of 120 in total

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