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SCNpilot_bf_inoc_scaffold_1092_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1092_curated_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(645..1001)
DNA (357bp) protein (119aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2J5_PALPW
cupin 2 conserved barrel domain protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADQ78939.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_1092_curated_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1232..1951)
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 1
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F5_PALPW
SCNpilot_bf_inoc_scaffold_1092_curated_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2062..3348
DNA (1287bp) protein (429aa)
fad-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T292_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_1092_curated_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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3417..4805
DNA (1389bp) protein (463aa)
transport protein id=4428166 bin=GWA2_Bacteroidetes_42_15 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
major facilitator superfamily protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1092_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4931..6451
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78998.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_1092_curated_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6516..7655
DNA (1140bp) protein (380aa)
Acyltransferase 3 n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KEY5_9BACT
Acyltransferase {ECO:0000313|EMBL:KIC94509.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
acyltransferase 3
SCNpilot_bf_inoc_scaffold_1092_curated_7
unknown

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comp(7592..7768)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1092_curated_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7848..8459
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003726B52
TetR family transcriptional regulator
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_1092_curated_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8470..9840
DNA (1371bp) protein (457aa)
Outer membrane efflux protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F7I7_9BACE
outer membrane efflux protein rbh
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_1092_curated_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9860..10882
DNA (1023bp) protein (341aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Bacteroides RepID=A7UZN0_BACUN
membrane fusion protein transporter
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_1092_curated_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10909..14025
DNA (3117bp) protein (1039aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X2T5_9PORP
cation efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_1092_curated_12
unknown

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comp(14380..14874)
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1092_curated_13
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(15311..16147)
DNA (837bp) protein (279aa)
id=2052520 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_39_28_curated
SCNpilot_bf_inoc_scaffold_1092_curated_14
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16154..16939)
DNA (786bp) protein (262aa)
Putative uncharacterized protein id=4347114 bin=GWF2_Bacteroidetes_29_10 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:CDB12042.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
hypothetical protein
Displaying 14 items

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