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SCNpilot_bf_inoc_scaffold_2040_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2040_curated_1
Capnocytophaga sp. oral taxon 326, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2..400
DNA (399bp) protein (133aa)
YD repeat-containing protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DA29
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EKY18829.1}; Flags: Fragment;; TaxID=1035193 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 326 str. F0382.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_2040_curated_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(602..1144)
DNA (543bp) protein (181aa)
CiaB protein id=3442696 bin=GWF2_Bacteroidetes_42_66 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
DNA-binding protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_2040_curated_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1169..1276)
DNA (108bp) protein (36aa)
CiaB protein id=2280628 bin=GWA2_Bacteroidetes_42_15 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_2040_curated_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1504..4017)
DNA (2514bp) protein (838aa)
ATPase AAA-2 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2R0_PALPW
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ADQ79004.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
ATPase AAA; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
SCNpilot_bf_inoc_scaffold_2040_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4589..6337
DNA (1749bp) protein (583aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2R2_PALPW
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ADQ79006.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_2040_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6407..7432)
DNA (1026bp) protein (342aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103]
L-threonine 3-dehydrogenase id=1897824 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_2040_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7570..8754)
DNA (1185bp) protein (395aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29]
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T182_PALPW
SCNpilot_bf_inoc_scaffold_2040_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8936..9352)
DNA (417bp) protein (139aa)
putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000372A1D4
Putative transcriptional regulator {ECO:0000313|EMBL:AEW01037.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 8 items

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