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SCNpilot_bf_inoc_scaffold_808_curated

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_808_curated_1
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

446..1342
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JFX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49037.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
endonuclease/exonuclease/phosphatase; K06896
SCNpilot_bf_inoc_scaffold_808_curated_2
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1524..5486
DNA (3963bp) protein (1321aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8Y0J6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY55817.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
S-layer protein
SCNpilot_bf_inoc_scaffold_808_curated_3
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5654..7051
DNA (1398bp) protein (466aa)
IPT/TIG domain-containing protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6VF84_9BACE
IPT/TIG domain-containing protein {ECO:0000313|EMBL:CDC90721.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_808_curated_4
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7064..10147
DNA (3084bp) protein (1028aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HIH3_BACT4
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS00970.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_808_curated_5
Prevotella sp. CAG:487, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10154..12172
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:487 RepID=R5PJ54_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ14094.1}; TaxID=1262928 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:487.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_808_curated_6
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12201..13256
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IKG6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI01999.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_808_curated_7
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13278..16229
DNA (2952bp) protein (984aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RAC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA53415.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
S-layer protein
SCNpilot_bf_inoc_scaffold_808_curated_8
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16305..17465
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZVK5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB55225.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
glycosidase PH1107-like protein
SCNpilot_bf_inoc_scaffold_808_curated_9
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17486..19477
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1031 RepID=R5AMK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAL86877.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
spore coat protein CotH
SCNpilot_bf_inoc_scaffold_808_curated_10
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19504..21204
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Pseudoalteromonas sp. NJ631 RepID=UPI0003653AC4
Uncharacterized protein {ECO:0000313|EMBL:KJY89416.1}; TaxID=43662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida.;"
PKD domain-containing protein
SCNpilot_bf_inoc_scaffold_808_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22111..23631
DNA (1521bp) protein (507aa)
glutamyL-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glutamate--tRNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T428_PALPW
SCNpilot_bf_inoc_scaffold_808_curated_12
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23896..25035
DNA (1140bp) protein (380aa)
Alpha-rhamnosidase n=1 Tax=Prevotella sp. CAG:487 RepID=R5PNE4_9BACT
Alpha integrin {ECO:0000313|EMBL:KFC22002.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_808_curated_13
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25317..27743)
DNA (2427bp) protein (809aa)
TonB-dependent receptor n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ETH1_EMTOG
TonB-dependent receptor {ECO:0000313|EMBL:KGO11335.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
TonB-dependent receptor
SCNpilot_bf_inoc_scaffold_808_curated_14
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27856..28524
DNA (669bp) protein (223aa)
Regulatory protein MarR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XX05_PEDHD
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:ACU04299.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_bf_inoc_scaffold_808_curated_15
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28521..29084
DNA (564bp) protein (188aa)
Lipocalin family protein n=1 Tax=Galbibacter marinus RepID=K2NYN5_9FLAO
Lipocalin family protein {ECO:0000313|EMBL:EKF53898.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_808_curated_16
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(29186..29548)
DNA (363bp) protein (121aa)
Transporter n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNY6_TREPZ
transporter
Transporter {ECO:0000313|EMBL:AEF85006.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
SCNpilot_bf_inoc_scaffold_808_curated_17
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(29545..30153)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNY7_TREPZ
hypothetical protein; K07025 putative hydrolase of the HAD superfamily
Uncharacterized protein {ECO:0000313|EMBL:AEF85950.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
SCNpilot_bf_inoc_scaffold_808_curated_18
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(30150..31127)
DNA (978bp) protein (326aa)
Prenyltransferase, UbiA family n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNY5_TREPZ
prenyltransferase, UbiA family
Prenyltransferase, UbiA family {ECO:0000313|EMBL:AEF86766.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
SCNpilot_bf_inoc_scaffold_808_curated_19
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31251..32816
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003761AAB
Putative phosphatidylinositol-4-phosphate 5-kinase {ECO:0000313|EMBL:CDA21958.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_808_curated_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32844..34154
DNA (1311bp) protein (437aa)
Glycosyl transferase, group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T426_PALPW
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ADQ79470.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_808_curated_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

34157..35065
DNA (909bp) protein (303aa)
Glycosyl transferase family 2 id=3682761 bin=GWF2_OP3_38_59 species=Calothrix parietina genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_bf_inoc_scaffold_808_curated_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

35077..35817
DNA (741bp) protein (247aa)
FkbM family methyltransferase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C4C8
methyltransferase fkbm family
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_bf_inoc_scaffold_808_curated_23
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36109..37152
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DX18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU89539.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
AAA domain protein; K07133
SCNpilot_bf_inoc_scaffold_808_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37294..37833
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Q8_PALPW
hypothetical protein; K06950 uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80052.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_808_curated_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37984..39453)
DNA (1470bp) protein (490aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Q7_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_808_curated_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39490..39699)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Q5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80049.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_808_curated_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39802..40167
DNA (366bp) protein (122aa)
UPF0102 protein Palpr_1909 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Q4_PALPW
hypothetical protein; K07460 putative endonuclease
UPF0102 protein Palpr_1909 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_808_curated_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40287..40922
DNA (636bp) protein (212aa)
orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Orotate phosphoribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Q3_PALPW
SCNpilot_bf_inoc_scaffold_808_curated_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40930..41355
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Q2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80046.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_808_curated_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41367..42704
DNA (1338bp) protein (446aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Argininosuccinate lyase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Q1_PALPW
Displaying items 1-30 of 31 in total

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