ggKbase home page

SCNpilot_bf_inoc_scaffold_2419_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2419_curated_1
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..239
DNA (237bp) protein (79aa)
Arsenical resistance operon trans-acting repressor ArsD n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3XNK2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKU91651.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
arsenical resistance operon trans-acting repressor
SCNpilot_bf_inoc_scaffold_2419_curated_2
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

265..1977
DNA (1713bp) protein (571aa)
arsenical pump-driving ATPase; K01551 arsenite-transporting ATPase [EC:3.6.3.16] rbh
Arsenite-activated ATPase ArsA n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KFC8_9BACE
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:CDB72150.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
SCNpilot_bf_inoc_scaffold_2419_curated_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1978..2778
DNA (801bp) protein (267aa)
Methyltransferase type 11 id=3870208 bin=GWC2_Bacteroidetes_46_850 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
type 11 methyltransferase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_2419_curated_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2883..3410
DNA (528bp) protein (176aa)
guaA3; putative GMP synthase (EC:6.3.5.2)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZ69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96564.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
SCNpilot_bf_inoc_scaffold_2419_curated_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3546..5054)
DNA (1509bp) protein (503aa)
ATP binding protein with AAA and HATPase domains id=1993862 bin=GWE2_Bacteroidetes_42_39 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
ATP binding protein with AAA and HATPase domains
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_2419_curated_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5051..5596)
DNA (546bp) protein (182aa)
Uncharacterized protein id=4027846 bin=GWF2_Bacteroidetes_42_66 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_2419_curated_7
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5726..6259)
DNA (534bp) protein (178aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4H2_SPHS2
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADZ80743.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_bf_inoc_scaffold_2419_curated_8
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6522..6974)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5NP34_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ05965.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
acetyltransferase
SCNpilot_bf_inoc_scaffold_2419_curated_9
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6994..7323)
DNA (330bp) protein (110aa)
Uncharacterized protein id=4414296 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_2419_curated_10
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7587..8747
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F5F0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95451.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
putative transmembrane acyltransferase protein
SCNpilot_bf_inoc_scaffold_2419_curated_11
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9189..9752
DNA (564bp) protein (188aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NKM4_9BACE
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EEF87538.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
cAMP-binding DNA-binding protein
SCNpilot_bf_inoc_scaffold_2419_curated_12
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9763..10116)
DNA (354bp) protein (118aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
HipA domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L417_HALH1
Uncharacterized protein {ECO:0000313|EMBL:CDN30183.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
SCNpilot_bf_inoc_scaffold_2419_curated_13

Not on your lists

comp(10220..10822)
DNA (603bp) protein (201aa)
Metal dependent phosphohydrolase (Fragment) n=1 Tax=human gut metagenome RepID=K1SRX3_9ZZZZ
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EKC58189.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_2419_curated_14
Prevotella marshii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10900..11649)
DNA (750bp) protein (250aa)
Topoisomerase DNA-binding C4 zinc finger domain protein n=1 Tax=Prevotella marshii DSM 16973 RepID=E0NSF8_9BACT
Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:EFM01910.1}; TaxID=862515 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella marshii DSM 16973 = JCM 13450.;"
NERD domain-containing protein
SCNpilot_bf_inoc_scaffold_2419_curated_15
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11904..12101)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=root RepID=S0FB66_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE18172.1}; TaxID=1121100 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes DSM 20611 = JCM 6294.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_2419_curated_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12098..12808)
DNA (711bp) protein (237aa)
Metal dependent hydrolase n=1 Tax=Clostridium tetani 12124569 RepID=U6EX91_CLOTA
Metal dependent hydrolase {ECO:0000313|EMBL:CEN95144.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
metal dependent hydrolase
SCNpilot_bf_inoc_scaffold_2419_curated_17
Prevotella sp. CAG:592, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12849..16004)
DNA (3156bp) protein (1052aa)
Type III restriction protein res subunit n=1 Tax=Prevotella sp. CAG:592 RepID=R6XFG9_9BACT
Type III restriction protein res subunit {ECO:0000313|EMBL:CDD05072.1}; TaxID=1262931 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:592.;"
type III restriction protein res subunit
Displaying 17 items

View Taxonomy