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SCNpilot_bf_inoc_scaffold_359_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_359_curated_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..379
DNA (378bp) protein (126aa)
acsA; Acetate--CoA ligase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetyl-coenzyme A synthetase id=2095728 bin=GWD2_Bacteroidales_45_23 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_359_curated_2
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(416..1204)
DNA (789bp) protein (263aa)
Transcriptional regulator DeoR family n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F214_9BACE
Transcriptional regulator DeoR family {ECO:0000313|EMBL:CCX94306.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
DeoR family transcriptional regulator; K02081 DeoR family transcriptional regulator, aga operon transcriptional repressor
SCNpilot_bf_inoc_scaffold_359_curated_3
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1471..2613
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X1B5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ65148.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
phosphosugar isomerase
SCNpilot_bf_inoc_scaffold_359_curated_4
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2640..3866
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESG5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94304.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_359_curated_5
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3866..4816
DNA (951bp) protein (317aa)
PfkB domain protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EP95_9BACE
PfkB domain protein {ECO:0000313|EMBL:CCX94303.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
sugar kinase
SCNpilot_bf_inoc_scaffold_359_curated_6
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4813..5631
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031C9F63
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:CCX94302.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ketose-bisphosphate aldolase
SCNpilot_bf_inoc_scaffold_359_curated_7
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5647..6726
DNA (1080bp) protein (360aa)
Amidohydrolase 2 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L623_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KKB59303.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
amidohydrolase
SCNpilot_bf_inoc_scaffold_359_curated_8
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6745..8790
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X1B2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB46164.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
glycoside hydrolase, clan GH-D
SCNpilot_bf_inoc_scaffold_359_curated_9
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8941..11934
DNA (2994bp) protein (998aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides sp. CAG:545 RepID=R5S107_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ44544.1}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
TonB-linked outer membrane protein, SusC/RagA family
SCNpilot_bf_inoc_scaffold_359_curated_10
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11957..13630
DNA (1674bp) protein (558aa)
RagB/SusD domain-containing protein n=1 Tax=Bacteroides sp. CAG:545 RepID=R5RTI9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB46166.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
ragB/SusD family protein
SCNpilot_bf_inoc_scaffold_359_curated_11
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13654..14559
DNA (906bp) protein (302aa)
PKD domain containing protein id=2649662 bin=GWF2_Lentisphaerae_52_8 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
PKD domain-containing protein {ECO:0000313|EMBL:AHM62255.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
PKD domain-containing protein
SCNpilot_bf_inoc_scaffold_359_curated_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14658..16046
DNA (1389bp) protein (463aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZB36_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21707.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_359_curated_13
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16092..17780
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248E7E7
Uncharacterized protein {ECO:0000313|EMBL:ESU18807.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_359_curated_14
unknown

Not on your lists

17859..19109
DNA (1251bp) protein (417aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_359_curated_15
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19213..20628
DNA (1416bp) protein (472aa)
Alpha-N-acetylgalactosaminidase (EC:3.2.1.49)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A8M6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20091.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
SCNpilot_bf_inoc_scaffold_359_curated_16
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20830..21918
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368E1E8
Uncharacterized protein {ECO:0000313|EMBL:CDD90792.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_359_curated_17
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22082..24067
DNA (1986bp) protein (662aa)
glucosamine-6-phosphate deaminase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
Glucosamine-6-phosphate deaminase-like protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZN4_9PORP
Glucosamine-6-phosphate deaminase-like protein {ECO:0000313|EMBL:EGK01029.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_bf_inoc_scaffold_359_curated_18
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

24100..27501
DNA (3402bp) protein (1134aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF34141.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Spore coat protein CotH id=4408774 bin=GWF2_Bacteroidetes_49_14 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
SCNpilot_bf_inoc_scaffold_359_curated_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27578..28243)
DNA (666bp) protein (222aa)
lipoate-protein ligase b (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
Octanoyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0G4_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_359_curated_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28245..28979)
DNA (735bp) protein (245aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-]
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0G3_PALPW
SCNpilot_bf_inoc_scaffold_359_curated_21
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29059..30402)
DNA (1344bp) protein (448aa)
RNA-binding s4 domain protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T154_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_359_curated_22
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30656..32176)
DNA (1521bp) protein (507aa)
primary replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12]
Primary replicative DNA helicase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N3_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_359_curated_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32239..33066)
DNA (828bp) protein (276aa)
4-diphosphocytidyL-2-c-methyL-d-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N2_PALPW
SCNpilot_bf_inoc_scaffold_359_curated_24
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33392..34549
DNA (1158bp) protein (386aa)
Transcriptional regulator, AraC family {ECO:0000313|EMBL:GAO28324.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
Uncharacterized protein id=3941666 bin=GWF2_Bacteroidetes_41_61 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
SCNpilot_bf_inoc_scaffold_359_curated_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34553..35395
DNA (843bp) protein (281aa)
lipoic acid synthetase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1J3_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_359_curated_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35478..37055
DNA (1578bp) protein (526aa)
Peptide chain release factor 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1S9_PALPW
bacterial peptide chain release factor 3 (brf-3); K02837 peptide chain release factor 3
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_359_curated_27
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37194..38171)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S0H2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL90089.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_359_curated_28
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38477..41710
DNA (3234bp) protein (1078aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UHS9_TANFA
Uncharacterized protein {ECO:0000313|EMBL:BAR51337.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_359_curated_29
unknown

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comp(41786..43438)
DNA (1653bp) protein (551aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_359_curated_30
unknown

Not on your lists

comp(43499..43804)
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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