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SCNpilot_bf_inoc_scaffold_528_curated

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_528_curated_31
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(28831..29499)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7D1_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_528_curated_32
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29839..30303
DNA (465bp) protein (155aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).
Phosphopantetheine adenylyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7D3_PALPW
SCNpilot_bf_inoc_scaffold_528_curated_33
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30352..32016
DNA (1665bp) protein (555aa)
c-terminal processing peptidase-3; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
C-terminal processing peptidase-3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7D4_PALPW
C-terminal processing peptidase-3 {ECO:0000313|EMBL:ADQ80628.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_34
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32013..32795
DNA (783bp) protein (261aa)
O-methyltransferase-like protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7D7_PALPW
O-methyltransferase-like protein
O-methyltransferase-like protein {ECO:0000313|EMBL:ADQ80631.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_35
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32898..33446
DNA (549bp) protein (183aa)
ATP:cob(i)alamin adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PSU1_9BACE
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EGF57201.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
SCNpilot_bf_inoc_scaffold_528_curated_36
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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33521..33742
DNA (222bp) protein (74aa)
Putative uncharacterized protein id=3243627 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_bf_inoc_scaffold_528_curated_37
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33886..34845
DNA (960bp) protein (320aa)
Putative membrane protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7E0_PALPW
membrane protein
Putative membrane protein {ECO:0000313|EMBL:ADQ80634.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_38
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34900..36273
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7E1_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80635.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_39
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36304..37248
DNA (945bp) protein (315aa)
Gliding motility-associated protein GldL n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7E2_PALPW
gliding motility-associated protein gldl
Gliding motility-associated protein GldL {ECO:0000313|EMBL:ADQ80636.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_40
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37273..38808
DNA (1536bp) protein (512aa)
Gliding motility-associated protein GldM n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7E3_PALPW
gliding motility-associated protein gldm
Gliding motility-associated protein GldM {ECO:0000313|EMBL:ADQ80637.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_41
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38860..39834
DNA (975bp) protein (325aa)
Gliding motility associated protein GldN n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7E4_PALPW
gliding motility associated protein gldn
Gliding motility associated protein GldN {ECO:0000313|EMBL:ADQ80638.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_42
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(39814..40410)
DNA (597bp) protein (199aa)
Putative uncharacterized protein id=1939665 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_528_curated_43
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40407..41147)
DNA (741bp) protein (247aa)
biotin/acetyL-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T513_PALPW
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ADQ79807.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_44
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41154..43610)
DNA (2457bp) protein (819aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
primosomal protein n'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Primosomal protein N' n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5N7_PALPW
SCNpilot_bf_inoc_scaffold_528_curated_45
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43908..44450)
DNA (543bp) protein (181aa)
NADPH-dependent FMN reductase id=1885385 bin=GWD2_Bacteroidales_45_23 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
NADPH-dependent FMN reductase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_528_curated_46
unknown

Not on your lists

comp(44660..45577)
DNA (918bp) protein (306aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_528_curated_47
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45636..47339)
DNA (1704bp) protein (568aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X289_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05905.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
cobalamin binding domain-containing protein
SCNpilot_bf_inoc_scaffold_528_curated_48
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(47374..48324)
DNA (951bp) protein (317aa)
Putative SUA5-like translation factor id=1772673 bin=GWE2_Bacteroidetes_40_15 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Putative SUA5-like translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_528_curated_49
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48691..49599
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3D5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79229.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_50
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49604..50638
DNA (1035bp) protein (345aa)
udp-galactose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-galactose 4-epimerase {ECO:0000313|EMBL:ADQ79228.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ADQ79228.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
UDP-galactose 4-epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3D4_PALPW
SCNpilot_bf_inoc_scaffold_528_curated_51
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50643..51620
DNA (978bp) protein (326aa)
mannose-6-phosphate isomerase, type 1 (EC:5.3.1.8); K01809 mannose-6-phosphate isomerase [EC:5.3.1.8]
Mannose-6-phosphate isomerase, type 1 {ECO:0000313|EMBL:ADQ79227.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ADQ79227.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Mannose-6-phosphate isomerase, type 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3D3_PALPW
SCNpilot_bf_inoc_scaffold_528_curated_52
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51630..52166)
DNA (537bp) protein (179aa)
gcn5-related N-acetyltransferase; K00657 diamine N-acetyltransferase [EC:2.3.1.57]
GCN5-related N-acetyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3D2_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_528_curated_53
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52179..53474)
DNA (1296bp) protein (432aa)
putative pyruvate carboxylase subunit B; K01960 pyruvate carboxylase subunit B [EC:6.4.1.1]
Putative pyruvate carboxylase subunit B n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UMB6_TANFA
Putative pyruvate carboxylase subunit B {ECO:0000313|EMBL:BAR52627.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
SCNpilot_bf_inoc_scaffold_528_curated_54
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53579..54025)
DNA (447bp) protein (149aa)
putative pyruvate carboxylase subunit B; K01960 pyruvate carboxylase subunit B [EC:6.4.1.1]
Putative pyruvate carboxylase subunit B n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UMB6_TANFA
Putative pyruvate carboxylase subunit B {ECO:0000313|EMBL:BAR52627.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
SCNpilot_bf_inoc_scaffold_528_curated_55
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54567..55430)
DNA (864bp) protein (288aa)
Putative uncharacterized protein id=3878343 bin=GWF2_Bacteroidetes_38_335 species=Capnocytophaga canimorsus genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
SCNpilot_bf_inoc_scaffold_528_curated_56
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55443..55886)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3D1_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79225.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_57
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55935..56372)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3D0_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_528_curated_58
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56378..57001)
DNA (624bp) protein (208aa)
Recombination protein RecR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3C9_PALPW
DNA replication and repair protein recr; K06187 recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_59
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57143..58648
DNA (1506bp) protein (502aa)
Na+/solute symporter n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3C8_PALPW
na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ADQ79222.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_528_curated_60
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

58614..58742
DNA (129bp) protein (43aa)
Probable GTP-binding protein EngB n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZS76_9PORP
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein
Displaying items 31-60 of 60 in total

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