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SCNpilot_bf_inoc_scaffold_233_curated

Search features with annotation key words

Displaying items 31-60 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_233_curated_31
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44225..44662)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4H4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79618.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_233_curated_32
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45133..46074
DNA (942bp) protein (314aa)
malate dehydrogenase (nad) (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37]
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Malate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7P9_PALPW
SCNpilot_bf_inoc_scaffold_233_curated_33
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46162..46578
DNA (417bp) protein (139aa)
Ferric uptake regulator, Fur family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q1_PALPW
ferric uptake regulator, fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_34
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46803..48074
DNA (1272bp) protein (424aa)
Surface antigen (D15) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q2_PALPW
surface antigen (d15)
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_35
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48074..49183
DNA (1110bp) protein (370aa)
Glycosyl transferase family 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q3_PALPW
family 2 glycosyl transferase
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_36
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria

Not on your lists

49342..50301
DNA (960bp) protein (320aa)
modification methylase n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035CA377
Methylase protein {ECO:0000313|EMBL:KKR25600.1}; TaxID=1618515 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_7.;"
DNA methylase
SCNpilot_bf_inoc_scaffold_233_curated_37
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

50285..51382
DNA (1098bp) protein (366aa)
Putative uncharacterized protein id=4022017 bin=GWF2_Ignavibacteria_35_20 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
SCNpilot_bf_inoc_scaffold_233_curated_38
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

51379..52263
DNA (885bp) protein (295aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JEM5_9BACT
site-specific DNA methylase
Tax=CG_Bacteroid_01
SCNpilot_bf_inoc_scaffold_233_curated_39
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52452..52967)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80748.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_233_curated_40
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53001..54005)
DNA (1005bp) protein (335aa)
Aldo/keto reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q5_PALPW
aldo/keto reductase
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_41
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54024..54614)
DNA (591bp) protein (197aa)
LemA family protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FDU4_9BACE
lema family protein; K03744 LemA protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_42
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54768..56108)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q7_PALPW
hypothetical protein; K06872 uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80751.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_233_curated_43
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56115..56585)
DNA (471bp) protein (157aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q8_PALPW
peptidylprolyl isomerase fkbp-type
SCNpilot_bf_inoc_scaffold_233_curated_44
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56623..57513)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q9_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_45
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57522..58817)
DNA (1296bp) protein (432aa)
udp-N-acetylmuramoyL-tripeptide--d-alanyL-d-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7R0_PALPW
SCNpilot_bf_inoc_scaffold_233_curated_46
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58837..59478)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7R1_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_47
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

59608..60993
DNA (1386bp) protein (462aa)
DNA recombination protein RmuC n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZUJ5_9BACT
DNA recombination protein RmuC {ECO:0000313|EMBL:EON77693.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_233_curated_48
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

61171..61482
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T436_PALPW
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_49
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61512..61856)
DNA (345bp) protein (115aa)
DUF488 domain-containing protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6PEE5_9CLOT
DUF488 domain-containing protein {ECO:0000313|EMBL:CDC21910.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
PF04343 family protein
SCNpilot_bf_inoc_scaffold_233_curated_50
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61864..62349)
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=3677057 bin=GWF2_Bacteroidetes_43_63 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_51
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


62454..63233
DNA (780bp) protein (260aa)
dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5J1_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_52
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

63324..64271
DNA (948bp) protein (316aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2M1_PALPW
magnesium and cobalt transport protein cora; K03284 magnesium transporter
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_53
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(64274..65677)
DNA (1404bp) protein (468aa)
Sialic acid-specific 9-O-acetylesterase n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IDM3_9BACE
sialic acid-specific acetylesterase II rbh
Sialic acid-specific 9-O-acetylesterase {ECO:0000313|EMBL:EFI04727.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
SCNpilot_bf_inoc_scaffold_233_curated_54
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

65973..66578
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZN97_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_bf_inoc_scaffold_233_curated_55
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66624..67094
DNA (471bp) protein (157aa)
Adenylate cyclase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T7_PALPW
adenylate cyclase
Adenylate cyclase {ECO:0000313|EMBL:ADQ78681.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_233_curated_56
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

67098..67871
DNA (774bp) protein (258aa)
5'-Nucleotidase domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5I4_PALPW
5'-nucleotidase domaiN-containing protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_57
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

67876..68724
DNA (849bp) protein (283aa)
metallophosphoesterase; K01081 5'-nucleotidase [EC:3.1.3.5]
Metallophosphoesterase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5I5_PALPW
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_58
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68804..70252
DNA (1449bp) protein (483aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6M2_PALPW
RNA polymerase, sigma 54 subunit, rpon/sigl; K03092 RNA polymerase sigma-54 factor
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_59
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

70261..70881
DNA (621bp) protein (207aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6M1_PALPW
phosphoesterase pa-phosphatase related protein
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_233_curated_60
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

71100..72050
DNA (951bp) protein (317aa)
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6M0_PALPW
bacterial peptide chain release factor 2 (brf-2); K02836 peptide chain release factor 2
Tax=CG_Paludi_01
Displaying items 31-60 of 97 in total

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