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SCNpilot_bf_inoc_scaffold_879_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_879_curated_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(226..2421)
DNA (2196bp) protein (732aa)
O-GlcNAcase {ECO:0000313|EMBL:KDS67604.1}; EC=3.2.1.169 {ECO:0000313|EMBL:KDS67604.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
glycoside hydrolase; K01197 hyaluronoglucosaminidase [EC:3.2.1.35]
O-GlcNAcase NagJ n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IU82_9BACE
SCNpilot_bf_inoc_scaffold_879_curated_2
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2461..4218)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P0R3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ10120.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
exported protein, ATP/GTP-binding
SCNpilot_bf_inoc_scaffold_879_curated_3
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4237..6195)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZKM1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB49266.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_879_curated_4
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6201..7289)
DNA (1089bp) protein (363aa)
O-succinylbenzoic acid-CoA ligase; K01911 O-succinylbenzoic acid--CoA ligase [EC:6.2.1.26] rbh
O-succinylbenzoic acid-CoA ligase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RFV2_9BACE
O-succinylbenzoic acid-CoA ligase {ECO:0000313|EMBL:EOA54912.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
SCNpilot_bf_inoc_scaffold_879_curated_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7302..8366)
DNA (1065bp) protein (355aa)
O-succinylbenzoate synthase n=3 Tax=Bacteroides RepID=K1GM90_BACFG
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:EYA20097.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
putative muconate cycloisomerase
SCNpilot_bf_inoc_scaffold_879_curated_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8363..9187)
DNA (825bp) protein (275aa)
1,4-Dihydroxy-2-naphthoate synthase (EC:4.1.3.36)
dihydroxynaphthoic acid synthetase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036B7A3B
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_879_curated_7
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9191..10858)
DNA (1668bp) protein (556aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase (EC:2.2.1.9 2.5.1.64)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IT35_9PORP
SCNpilot_bf_inoc_scaffold_879_curated_8
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10865..11971)
DNA (1107bp) protein (369aa)
isochorismate synthase; K02361 isochorismate synthase [EC:5.4.4.2]
Isochorismate synthase entC n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RSB3_9BACE
Isochorismate synthase {ECO:0000313|EMBL:KKB51406.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
SCNpilot_bf_inoc_scaffold_879_curated_9
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11968..13197)
DNA (1230bp) protein (410aa)
Cof-like hydrolase n=4 Tax=Bacteroides RepID=C6IQC0_9BACE
haloacid dehalogenase; K07024 rbh
Putative hydrolase, haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:AAO79804.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
SCNpilot_bf_inoc_scaffold_879_curated_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(13353..13616)
DNA (264bp) protein (88aa)
XRE family transcriptional regulator n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BIL6_9BACT
putative transcriptional regulator with C-terminal CBS domains
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_bf_inoc_scaffold_879_curated_11
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13746..15668)
DNA (1923bp) protein (641aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AWN9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS18927.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
helicase
SCNpilot_bf_inoc_scaffold_879_curated_12
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16177..18423
DNA (2247bp) protein (749aa)
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase n=3 Tax=Parabacteroides RepID=K5YRQ1_9PORP
Aconitate hydratase {ECO:0000313|EMBL:KKB49400.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
SCNpilot_bf_inoc_scaffold_879_curated_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18431..19696
DNA (1266bp) protein (422aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6AM59_9PORP
SCNpilot_bf_inoc_scaffold_879_curated_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19700..21052
DNA (1353bp) protein (451aa)
citrate synthase (EC:2.3.3.5); K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AF43_9PORP
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
SCNpilot_bf_inoc_scaffold_879_curated_15
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21123..22382)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LB25_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEY84830.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
SCNpilot_bf_inoc_scaffold_879_curated_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22538..22957
DNA (420bp) protein (140aa)
Na(+)-translocating NADH-quinone reductase subunit A {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00017509}; Short=Na(+)-NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; Short=Na(+)-translocating NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00179150};; NQR complex subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; NQR-1 subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroid
Na(+)-translocating NADH-quinone reductase subunit A; K00346 Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:1.6.5.-]
Na(+)-translocating NADH-quinone reductase subunit A n=3 Tax=Parabacteroides RepID=A7AEG2_9PORP
Displaying 16 items

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