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SCNpilot_bf_inoc_scaffold_371_curated

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_371_curated_31
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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42378..43655
DNA (1278bp) protein (426aa)
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Histidinol dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8R1_PALPW
SCNpilot_bf_inoc_scaffold_371_curated_32
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43731..44759
DNA (1029bp) protein (343aa)
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Histidinol-phosphate aminotransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8R0_PALPW
SCNpilot_bf_inoc_scaffold_371_curated_33
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44771..47092)
DNA (2322bp) protein (774aa)
Iron complex outermembrane recepter protein n=2 Tax=Parabacteroides RepID=N2AUF0_9PORP
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_bf_inoc_scaffold_371_curated_34
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47223..48167)
DNA (945bp) protein (315aa)
methionyL-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Methionyl-tRNA formyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8F1_PALPW
SCNpilot_bf_inoc_scaffold_371_curated_35
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48194..49375)
DNA (1182bp) protein (394aa)
Glycosyl transferase family 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0P0_PALPW
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADQ81104.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_36
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(49381..49941)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7C6_PALPW
ribosome recycling factor; K02838 ribosome recycling factor
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_371_curated_37
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50005..50712)
DNA (708bp) protein (236aa)
uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Uridylate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7C5_PALPW
SCNpilot_bf_inoc_scaffold_371_curated_38
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50872..51336
DNA (465bp) protein (155aa)
enoyL-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IBV0_9PORP
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_371_curated_39
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51615..53534
DNA (1920bp) protein (640aa)
Chaperone protein DnaK n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T825_PALPW
chaperone protein dnak; K04043 molecular chaperone DnaK
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_371_curated_40
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

53860..55413
DNA (1554bp) protein (518aa)
type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72] id=5050690 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
type I restriction-modification system subunit M (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
SCNpilot_bf_inoc_scaffold_371_curated_41
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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55462..56325
DNA (864bp) protein (288aa)
DNA-damage-inducible protein D family protein n=1 Tax=Porphyromonas gingivalis F0568 RepID=U2K0D9_PORGN
Uncharacterized protein {ECO:0000313|EMBL:KKB49733.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_371_curated_42
Prevotella sp. ICM33, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56318..56935
DNA (618bp) protein (206aa)
Putative restriction endonuclease type I S subunit n=1 Tax=Brachyspira pilosicoli P43/6/78 RepID=L0EW30_BRAPL
restriction endonuclease type I S subunit
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:ETS97633.1}; TaxID=1161412 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. ICM33.;"
SCNpilot_bf_inoc_scaffold_371_curated_43
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56965..57537
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Acinetobacter gerneri RepID=N8ZP53_9GAMM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EXE15647.1}; TaxID=1310660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 983759.;"
type I restriction-modification system specificity subunit
SCNpilot_bf_inoc_scaffold_371_curated_44
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

57546..58565
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HBT0_ILYPC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO83842.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
SCNpilot_bf_inoc_scaffold_371_curated_45
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58562..59032
DNA (471bp) protein (157aa)
Death-on-curing family protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AJY0_PELPD
death-on-curing family protein; K07341 death on curing protein
Death-on-curing family protein {ECO:0000313|EMBL:ABK97650.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
SCNpilot_bf_inoc_scaffold_371_curated_46
CG_CP01_01, CG_CP01, Bacteria

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59029..62178
DNA (3150bp) protein (1050aa)
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UNC4_METVS rbh
Tax=CG_CP01_01
SCNpilot_bf_inoc_scaffold_371_curated_47

Not on your lists

62193..62612
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Tetrasphaera phage TJE1 RepID=G4W998_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKM79380.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_bf_inoc_scaffold_371_curated_48
unknown

Not on your lists

63061..63177
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_371_curated_49
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63275..63571)
DNA (297bp) protein (99aa)
Putative toxin-antitoxin system, toxin component, HipA family n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JYF2_9BACE
HipA-like C-terminal domain./HipA-like N-terminal domain.
HipA-like C-terminal domain protein {ECO:0000313|EMBL:EEO48739.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
SCNpilot_bf_inoc_scaffold_371_curated_50
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63568..64050)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JIR9_9BACE
HipA-like C-terminal domain./HipA-like N-terminal domain.
Uncharacterized protein {ECO:0000313|EMBL:CDB57696.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
SCNpilot_bf_inoc_scaffold_371_curated_51
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(64047..64376)
DNA (330bp) protein (110aa)
HipA N-terminal domain n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CYW5_9BACE
HipA N-terminal domain
HipA N-terminal domain {ECO:0000313|EMBL:CBK67367.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
SCNpilot_bf_inoc_scaffold_371_curated_52
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(64385..64579)
DNA (195bp) protein (65aa)
Predicted transcriptional regulator with C-terminal CBS domains n=9 Tax=Bacteroides RepID=D6CYW4_9BACE
Predicted transcriptional regulator with C-terminal CBS domains
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEZ05701.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
SCNpilot_bf_inoc_scaffold_371_curated_53
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(64720..65742)
DNA (1023bp) protein (341aa)
Rnl2 family RNA ligase n=1 Tax=Prevotella sp. CAG:474 RepID=R6W6L4_9BACT
Rnl2 family RNA ligase {ECO:0000313|EMBL:CDC99806.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
RNA ligase, putative
SCNpilot_bf_inoc_scaffold_371_curated_54
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

66163..71001
DNA (4839bp) protein (1613aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
RecQ familyATP-dependent DNA helicase n=1 Tax=Flavobacterium sp. F52 RepID=J1ADX7_9FLAO
Tax=BJP_IG2102_Bacteroidetes_40_9
SCNpilot_bf_inoc_scaffold_371_curated_55
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(71141..72574)
DNA (1434bp) protein (478aa)
Uncharacterized protein (Fragment) n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B808_9PORP
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_bf_inoc_scaffold_371_curated_56
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(72541..73521)
DNA (981bp) protein (327aa)
Helicase domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ68_NIAKG
helicase domain-containing protein
Helicase domain-containing protein {ECO:0000313|EMBL:AEW01069.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_bf_inoc_scaffold_371_curated_57
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(73575..73760)
DNA (186bp) protein (62aa)
Helicase domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ68_NIAKG
helicase domain-containing protein
Helicase domain-containing protein {ECO:0000313|EMBL:AEW01069.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_bf_inoc_scaffold_371_curated_58
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

74003..75682
DNA (1680bp) protein (560aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Colwellia piezophila RepID=UPI00036AB16D
SCNpilot_bf_inoc_scaffold_371_curated_59
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75687..76823)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3W6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79410.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_bf_inoc_scaffold_371_curated_60
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(76820..77365)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3W5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79409.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 31-60 of 69 in total

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